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No association between the SOCS-1 −1478CA/del polymorphism and ulcerative colitis in Turkish subjects

dc.contributor.buuauthorHartavi, Mustafa
dc.contributor.buuauthorNak, Selim Giray
dc.contributor.buuauthorOral, Haluk Barbaros
dc.contributor.buuauthorDeligönül, Adem
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentGastroenteroloji Ana Bilim Dalı
dc.contributor.departmentİmmünoloji Ana Bilim Dalı
dc.contributor.departmentİç Hastalıkları Ana Bilim Dalı
dc.contributor.orcid0000-0003-0463-6818
dc.contributor.researcheridK-7285-2012
dc.contributor.scopusid55370753300
dc.contributor.scopusid6603336505
dc.contributor.scopusid7004498001
dc.contributor.scopusid37088030300
dc.date.accessioned2024-02-07T06:20:39Z
dc.date.available2024-02-07T06:20:39Z
dc.date.issued2014-06-19
dc.description.abstractSuppressor of cytokine signaling (SOCS)-1 is an essential regulator of many cytokine signaling pathways, including those upregulated in the inflamed colonic mucosa of patients with ulcerative colitis. We sought to investigate whether the functional SOCS-1 -1478CA > del polymorphism is associated with UC susceptibility and its disease phenotype in a Turkish clinical sample. A total of 104 subjects were enrolled in a case-control study (52 UC cases and 52 controls). The SOCS-1 -1478CA > del polymorphism was genotyped using a polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method. The odds ratio of the del allele for UC relative to the CA allele was not significant (OR = 1.04, 95 % CI 0.59-1.82, P = 0.88). These results did not change after adjustment for age and sex in multivariable regression analysis (OR = 1.07, 95 % CI 0.42-1.69, P = 0.73). When the SOCS-1 -1478CA > del polymorphism was analyzed among UC patients according to continuous disease and non-continuous disease, the del allele was not associated with disease recurrence (OR = 1.56, 95 % CI 0.78-4.56, P = 0.83). Furthermore, when we divided UC patients into two groups according to a previous history of colectomy, we found no significant effect of the del allele (OR = 1.94, 95 % CI 0.55-5.61, P = 0.91). Taken together, these findings suggest that SOCS-1 -1478CA > del polymorphism does not contribute to UC susceptibility and its disease phenotype in Turkish subjects.
dc.identifier.citationHartavi, M. vd. (2014). "No association between the SOCS-1 −1478CA/del polymorphism and ulcerative colitis in Turkish subjects". Molecular Biology Reports, 41(10), 6505-6508.
dc.identifier.doi10.1007/s11033-014-3533-7
dc.identifier.endpage6508
dc.identifier.issn0301-4851
dc.identifier.issn1573-4978
dc.identifier.issue10
dc.identifier.pubmed24985978
dc.identifier.scopus2-s2.0-84919385511
dc.identifier.startpage6505
dc.identifier.urihttps://doi.org/10.1007/s11033-014-3533-7
dc.identifier.urihttps://link.springer.com/article/10.1007/s11033-014-3533-7
dc.identifier.urihttps://hdl.handle.net/11452/39575
dc.identifier.volume41
dc.identifier.wos000342440000021
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherSpringer
dc.relation.journalMolecular Biology Reports
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectAssociation study
dc.subjectUlcerative colitis
dc.subjectPolymorphism
dc.subjectSuppressor of cytokine signaling
dc.subjectInflammatory-bowel-disease
dc.subjectExpression
dc.subjectTyrosine kinase
dc.subjectSuppressor
dc.subjectCrohns-disease
dc.subjectMessenger-rna
dc.subject.emtreeArticle
dc.subject.emtreeControlled study
dc.subject.emtreeFemale
dc.subject.emtreeGene deletion
dc.subject.emtreeGene frequency
dc.subject.emtreeGenetic association
dc.subject.emtreeGenetic polymorphism
dc.subject.emtreeGenetic variability
dc.subject.emtreeHuman
dc.subject.emtreeMajor clinical study
dc.subject.emtreeMale
dc.subject.emtreePhenotype
dc.subject.emtreeRecurrent disease
dc.subject.emtreeRegulator gene
dc.subject.emtreeRestriction fragment length polymorphism
dc.subject.emtreeReverse transcription polymerase chain reaction
dc.subject.emtreeRisk assessment
dc.subject.emtreeSocs 1 gene
dc.subject.emtreeTurk (people)
dc.subject.emtreeUlcerative colitis
dc.subject.emtreeAllele
dc.subject.emtreeCase control study
dc.subject.emtreeColitis, ulcerative
dc.subject.emtreeGenetic association
dc.subject.emtreeGenetics
dc.subject.emtreeGenotype
dc.subject.emtreeMiddle aged
dc.subject.emtreeRisk
dc.subject.emtreeTurkey
dc.subject.emtreeYoung adult
dc.subject.emtreeAlanine
dc.subject.emtreeCysteine
dc.subject.emtreeSuppressor of cytokine signaling 1
dc.subject.emtreeSocs1 protein, human
dc.subject.emtreeSuppressor of cytokine signaling
dc.subject.meshAdult
dc.subject.meshAlleles
dc.subject.meshCase-control studies
dc.subject.meshColitis, ulcerative
dc.subject.meshFemale
dc.subject.meshGenetic association studies
dc.subject.meshGenotype
dc.subject.meshHumans
dc.subject.meshMale
dc.subject.meshMiddle aged
dc.subject.meshOdds ratio
dc.subject.meshPolymorphism, genetic
dc.subject.meshSuppressor of cytokine signaling proteins
dc.subject.meshTurkey
dc.subject.meshYoung adult
dc.subject.scopusSuppressor of Cytokine Signaling; Suppressors; Cytokines
dc.subject.wosBiochemistry & molecular biology
dc.titleNo association between the SOCS-1 −1478CA/del polymorphism and ulcerative colitis in Turkish subjects
dc.typeArticle
dc.wos.quartileQ3 (Biochemistry & Molecular Biology)
dspace.entity.typePublication
local.contributor.departmentTıp Fakültesi/İç Hastalıkları Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Gastroenteroloji Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/İmmünoloji Ana Bilim Dalı
local.indexed.atWOS
local.indexed.atScopus

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