Investigation of the genetic diversity among native Turkish sheep breeds using mtDNA polymorphisms

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dc.contributor.authorHugo Calvo, Jorge
dc.contributor.buuauthorÖner, Yasemin
dc.contributor.buuauthorElmacı, Cengiz
dc.contributor.departmentUludağ Üniversitesi/Ziraat Fakültesi/Hayvan Besleme ve Beslenme Hastalıkları Anabilim Dalı.tr_TR
dc.contributor.orcid0000-0003-4819-0221tr_TR
dc.contributor.orcid0000-0002-2904-8986tr_TR
dc.contributor.researcheridABB-3181-2020tr_TR
dc.contributor.researcheridV-7882-2019tr_TR
dc.contributor.scopusid9634793800tr_TR
dc.contributor.scopusid6602597697tr_TR
dc.date.accessioned2022-12-05T12:03:15Z
dc.date.available2022-12-05T12:03:15Z
dc.date.issued2012-11-29
dc.description.abstractA total of 135 unrelated sheep from nine Turkish native sheep breeds (DaglA +/- c, Kivircik, Imroz, Chios, Morkaraman, Ivesi, Hemsin, Karayaka and Akkaraman) were investigated to determinate the maternal genetic diversity using a sequence of a 531-bp segment of the mtDNA control region. Analysis of the mtDNA control region sequence revealed 63 haplotypes and 53 polymorphic sites. Haplotype diversity, nucleotide diversity and the average number of nucleotide differences were estimated to be 0.9496 +/- 0.011, 0.01407 +/- 0.00060 and 7.456, respectively. The sequence analysis also revealed high level of genetic diversity among the native Turkish breeds. These breeds were grouped into three major maternal haplogroups: A, B and C, with one animal belonging from the Akkaraman breed to the rare haplogroup E. Irregular shape of mismatch distribution of haplogroup C could be an indicator that haplogroup C may represent different haplogroups. Contrarily to previous studies carried out on Turkish native breeds, majority of animals grouped in haplogroup A in the present study. This result and the irregular shape of mismatch curve of haplogroup C indicate that genetic structure of Turkish native sheep breeds could be more complicated than it is thought.en_US
dc.identifier.citationÖner, Y. vd. (2013). "Investigation of the genetic diversity among native Turkish sheep breeds using mtDNA polymorphisms". Tropical Animal Health and Production, 45(4), 947-951.en_US
dc.identifier.endpage951tr_TR
dc.identifier.issn0049-4747
dc.identifier.issn1573-7438
dc.identifier.issue4tr_TR
dc.identifier.pubmed23135986tr_TR
dc.identifier.scopus2-s2.0-84875530543tr_TR
dc.identifier.startpage947tr_TR
dc.identifier.urihttps://doi.org/10.1007/s11250-012-0313-z
dc.identifier.urihttps://link.springer.com/article/10.1007/s11250-012-0313-z
dc.identifier.urihttp://hdl.handle.net/11452/29672
dc.identifier.volume45tr_TR
dc.identifier.wos000316818600010tr_TR
dc.indexed.pubmedPubMeden_US
dc.indexed.scopusScopusen_US
dc.indexed.wosSCIEen_US
dc.language.isoenen_US
dc.publisherSpringeren_US
dc.relation.bapZ-2009/29tr_TR
dc.relation.collaborationSanayitr_TR
dc.relation.journalTropical Animal Health and Productionen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergitr_TR
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectAgricultureen_US
dc.subjectVeterinary sciencesen_US
dc.subjectDomesticationen_US
dc.subjectGenetic diversityen_US
dc.subjectmtDNAen_US
dc.subjectSheepen_US
dc.subjectDomestic sheepen_US
dc.subjectLineagesen_US
dc.subjectSequenceen_US
dc.subjectWilden_US
dc.subjectAnimaliaen_US
dc.subjectOvis ariesen_US
dc.subject.emtreeMitochondrial DNAen_US
dc.subject.emtreeAnimal diseaseen_US
dc.subject.emtreeArticleen_US
dc.subject.emtreeChemistryen_US
dc.subject.emtreeDNA sequenceen_US
dc.subject.emtreeFemaleen_US
dc.subject.emtreeGenetic variabilityen_US
dc.subject.emtreeGeneticsen_US
dc.subject.emtreeHaplotypeen_US
dc.subject.emtreeMaleen_US
dc.subject.emtreeMitochondrionen_US
dc.subject.emtreeMolecular geneticsen_US
dc.subject.emtreeNucleotide sequenceen_US
dc.subject.emtreePhylogenyen_US
dc.subject.emtreePolymerase chain reactionen_US
dc.subject.emtreeSequence alignmenten_US
dc.subject.emtreeSheepen_US
dc.subject.emtreeSingle nucleotide polymorphismen_US
dc.subject.emtreeTurkey (republic)en_US
dc.subject.meshAnimalsen_US
dc.subject.meshBase sequenceen_US
dc.subject.meshDNA, mitochondrialen_US
dc.subject.meshFemaleen_US
dc.subject.meshGenetic variationen_US
dc.subject.meshHaplotypesen_US
dc.subject.meshMaleen_US
dc.subject.meshMitochondriaen_US
dc.subject.meshMolecular sequence dataen_US
dc.subject.meshPhylogenyen_US
dc.subject.meshPolymerase chain reactionen_US
dc.subject.meshPolymorphism, single nucleotideen_US
dc.subject.meshSequence alignmenten_US
dc.subject.meshSequence analysis, DNAen_US
dc.subject.meshSheepen_US
dc.subject.meshTurkeyen_US
dc.subject.scopusSheep Breeds; Goats; Genetic Variabilityen_US
dc.subject.wosAgriculture, dairy & animal scienceen_US
dc.subject.wosVeterinary sciencesen_US
dc.titleInvestigation of the genetic diversity among native Turkish sheep breeds using mtDNA polymorphismsen_US
dc.typeArticle
dc.wos.quartileQ2en_US

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