Osteogenezis imperfekta tanılı hastaların genotip ve fenotip korelasyonu
Date
2020
Authors
Journal Title
Journal ISSN
Volume Title
Publisher
Bursa Uludağ Üniversitesi
Abstract
Osteogenezis imperfekta (Oİ), artmış kemik frajilitesi, düşük kemik kitlesi, tekrarlayan kırık ve deformitelerle karakterize, kemik dokusunun sık görülen kalıtsal bağ dokusu hastalığıdır. Bu çalışmada, 2016-2020 yılları arasında Bursa Uludağ Üniversitesi Tıp Fakültesi Tıbbi Genetik Anabilim Dalı polikliniğine başvuran, Oİ ön tanısı alan 54 olgu kullanıldı. Tanı amaçlı yapılan yeni nesil dizileme (YND) sonucunda genlerde saptanan varyantlar veritabanları kullanılarak olguların klinik özellikleri ile birlikte retrospektif olarak değerlendirildi. Olguların 17’si erişkin, 34’ü çocuk ve 3’ü fetüstü. 54 olguya klinik sınıflandırma yapıldığında 24 olgu Tip I, 3 olgu Tip II, 16 olgu Tip III, 9 olgu Tip IV olarak değerlendirildi. Olguların 30’unda mavi sklera, 16’sında skolyoz, 32’sinde çoklu kırığa bağlı ekstremite deformiteleri, 27’sinde osteoporoz, 19’unda osteopeni, 38’inde boy kısalığı, 7’sinde Dİ, 1’inde işitme kaybı görüldü. Olguların 19’unda COL1A1 geninde 17, 10’unda COL1A2 geninde 10, 4’ünde LEPRE1/P3H1 geninde 5, 3’ünde FKBP10 geninde 3, 2’sinde SERPINH1 geninde 3, 1’inde IFITM5 geninde 1, 1’inde PLS3 geninde 1, 1’inde NBAS geninde 2 varyant tespit edildi. Veri analizi yapılan 54 olgunun 41’inde, 18 yeni varyant olmak üzere toplam 39 varyant saptandı. Varyant saptanmayan 13 olguya tüm ekzom dizi analizi yapılması planlandı. Çalışmamızda Oİ’nin moleküler tanısında panel testinin YND tekniği ile çalışılmasının etkinliği, genotip-fenotip korelasyonu, genetik danışma ve preimplantasyon/prenatal tanının önemi vurgulandı.
Osteogenesis imperfecta (OI) is the most common inherited connective tissue disease of the bone, characterized by increased bone fragility, low bone mass, recurrent fractures and deformities. In this study, 54 patients who were admitted to the outpatient clinic of Bursa Uludağ University, Department of Medical Genetics between 2016-2020 and prediagnosed as OI were used. The variants detected in the genes as a result of rouitine next generation sequencing (NSD) diagnostic tests were evaluated retrospectively with the clinical data of the cases. 17 of the cases were adult, 34 were children and 3 were fetuses. 24 cases were evaluated as Type I, 3 cases as Type II, 16 cases as Type III, and 9 cases as Type IV. Blue sclera in 30, scoliosis in 16, extremity deformities due to multiple fractures in 32, osteoporosis in 27, osteopenia in 19, short stature in 38, DI in 7, and hearing loss in 1 case were seen. 17 variants in COL1A1 In nineteen caseses 10 variants in COL1A2 ; in ten cas, 5 variants in LEPRE1 / P3H1 in four cases, 3 variants in FKBP10 in three cases, 3 variants in SERPINH1 in two cases, 1 variant in IFITM5 , 1 variant in PLS3 and 2 variants in the NBAS gene in three cases were detected. A total of 39 variants were detected on 41 cases. 22 of these variants were novel. In our study, the effectiveness of the NGS panel test in the molecular diagnosis of OI, genotype-phenotype correlation, genetic counseling and preimplantation/prenatal diagnosis were emphasized.
Osteogenesis imperfecta (OI) is the most common inherited connective tissue disease of the bone, characterized by increased bone fragility, low bone mass, recurrent fractures and deformities. In this study, 54 patients who were admitted to the outpatient clinic of Bursa Uludağ University, Department of Medical Genetics between 2016-2020 and prediagnosed as OI were used. The variants detected in the genes as a result of rouitine next generation sequencing (NSD) diagnostic tests were evaluated retrospectively with the clinical data of the cases. 17 of the cases were adult, 34 were children and 3 were fetuses. 24 cases were evaluated as Type I, 3 cases as Type II, 16 cases as Type III, and 9 cases as Type IV. Blue sclera in 30, scoliosis in 16, extremity deformities due to multiple fractures in 32, osteoporosis in 27, osteopenia in 19, short stature in 38, DI in 7, and hearing loss in 1 case were seen. 17 variants in COL1A1 In nineteen caseses 10 variants in COL1A2 ; in ten cas, 5 variants in LEPRE1 / P3H1 in four cases, 3 variants in FKBP10 in three cases, 3 variants in SERPINH1 in two cases, 1 variant in IFITM5 , 1 variant in PLS3 and 2 variants in the NBAS gene in three cases were detected. A total of 39 variants were detected on 41 cases. 22 of these variants were novel. In our study, the effectiveness of the NGS panel test in the molecular diagnosis of OI, genotype-phenotype correlation, genetic counseling and preimplantation/prenatal diagnosis were emphasized.
Description
Keywords
Osteogenezis imperfekta, Yeni nesil dizileme, Yeni varyantlar, Genetik danışma, Osteogenesis imperfecta, Next generation sequencing, Novel variants, Genetic counseling
Citation
Aliyeva, L. (2020). Osteogenezis imperfekta tanılı hastaların genotip ve fenotip korelasyonu. Yayınlanmamış tıpta uzmanlık tezi. Bursa Uludağ Üniversitesi Tıp Fakültesi.