Publication:
Association of tnf-alpha-308 polymorphism with the outcome of hepatitis B virus infection in Turkey

dc.contributor.authorKarasu, Zeki
dc.contributor.authorBaştürk, Bilkay
dc.contributor.authorKılıç, Murat
dc.contributor.authorUlukaya, Sezgin
dc.contributor.authorBoyacıoğlu, Ahmet Sedat
dc.contributor.buuauthorOral, Haluk Barbaros
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentMikrobiyoloji ve Enfeksiyon Hastalıkları Ana Bilim Dalı İmmünoloji Ünitesi
dc.contributor.orcid0000-0003-0463-6818
dc.contributor.researcheridK-7285-2012
dc.contributor.scopusid7004498001
dc.date.accessioned2022-02-14T11:19:05Z
dc.date.available2022-02-14T11:19:05Z
dc.date.issued2008-01
dc.description.abstractBackground and aim: Cytokines play important roles in the regulation of immune response. The aim of the study was to investigate the association of the cytokine gene polymorphisms with persistence of hepatitis B virus (HBV) infection and the development of end-stage liver disease (ESLD) due to HBV infection. Methods: The study involved 27 patients with end-stage liver disease due to HBV infection, 23 HBV carriers and 60 healthy controls. All genotyping (TNF-alpha, TGF-beta, IL-10, IFN-gamma) experiments were performed using sequence specific primers (PCR-SSP) by using commercial kit according to manufacturers' instructions. Results: The frequencies of TNF-alpha -308 G/G and TGF-beta 1 codon 10-25 T/C-G/G polymorphisms were significantly higher in HBV-infected individuals (patients + carriers) when compared with those of healthy controls (p: 0.02 and p: 0.004, respectively). The frequency of TNF-alpha -308 G/G polymorphism was significantly higher in the patients than those of the healthy controls (p: 0.02), whereas the frequency of TGF-beta 1 codon 10-25 T/T-G/G polymorphism was lower (p: 0.028). On the other hand, TNF-alpha -308 G/G and TGF-beta codon 10-25 T/C-G/G polymorphisms were significantly more common in HBV carriers than the control group (p: 0.017 andp: 0.018, respectively). In addition, TNF-alpha -308 G allele frequency was significantly more common in HBV-infected individuals (patients + carriers) than those of healthy controls (p: 0.0007). TNF-alpha -308 G allele frequency was also found to be higher in patients or carriers when compared with those of healthy controls (p: 0.01 and p: 0.01, respectively). Statistically significant differences were still kept after Bonferroni correction of the p-values for only TNF-alpha -308 G allele frequency in patients or carriers (Pc). Conclusion: Our study suggests that TNF-alpha gene polymorphism in patients infected with HBV would result in relatively inefficient inhibition of HBV and development of ESLD, and therefore, may be valuable predictor determinants for the development of ESLD in patients with chronic HBV infection.
dc.identifier.citationBaştürk, B. vd. (2008). ''Association of TNF-alpha-308 polymorphism with the outcome of hepatitis B virus infection in Turkey''. Infection Genetics and Evolution, 8(1). 20-25.
dc.identifier.endpage25
dc.identifier.issn1567-1348
dc.identifier.issn1567-7257
dc.identifier.issue1
dc.identifier.pubmed17974504
dc.identifier.scopus2-s2.0-36749082117
dc.identifier.startpage20
dc.identifier.urihttps://doi.org/10.1016/j.meegid.2007.09.001
dc.identifier.urihttps://www.sciencedirect.com/science/article/pii/S1567134807001335
dc.identifier.urihttp://hdl.handle.net/11452/24455
dc.identifier.volume8
dc.identifier.wos000252940900003
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherElsevier
dc.relation.collaborationYurt içi
dc.relation.journalInfection Genetics and Evolution
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectHepatitis B virus
dc.subjectCytokines
dc.subjectGene polymorphisms
dc.subjectHepatic failure
dc.subjectHepatitis B
dc.subjectNecrosis-factor-alpha
dc.subjectInterleukin-10 gene promoter
dc.subjectAllele frequencies
dc.subjectT-cells
dc.subjectClearance
dc.subjectCytokines
dc.subjectCytokines
dc.subjectProgression
dc.subjectPopulation
dc.subjectTgf-beta-1
dc.subjectInfectious diseases
dc.subjectHepatic failure
dc.subject.emtreeCytokine
dc.subject.emtreeCytosine
dc.subject.emtreeGamma interferon
dc.subject.emtreeGuanine
dc.subject.emtreeInterleukin 10
dc.subject.emtreeInterleukin 6
dc.subject.emtreeThymine
dc.subject.emtreeTransforming growth factor beta
dc.subject.emtreeTumor necrosis factor alpha
dc.subject.emtreeArticle
dc.subject.emtreeClinical article
dc.subject.emtreeCodon
dc.subject.emtreeControlled study
dc.subject.emtreeDNA polymorphism
dc.subject.emtreeFemale
dc.subject.emtreeGene frequency
dc.subject.emtreeGenotype
dc.subject.emtreeHepatitis b
dc.subject.emtreeHepatitis b virus
dc.subject.emtreeHuman
dc.subject.emtreeLiver failure
dc.subject.emtreeMale
dc.subject.emtreePersistent infection
dc.subject.emtreePolymerase chain reaction
dc.subject.emtreePriority journal
dc.subject.emtreeTurkey (republic)
dc.subject.emtreeVirus carrier
dc.subject.meshDisease Progression
dc.subject.meshFemale
dc.subject.meshGenetic predisposition to disease
dc.subject.meshHepatitis b virus
dc.subject.meshHepatitis b
dc.subject.meshChronic
dc.subject.meshHumans
dc.subject.meshMale
dc.subject.meshPolymorphism, genetic
dc.subject.meshPrognosis
dc.subject.meshTumor necrosis factor-alpha
dc.subject.meshTurkey
dc.subject.scopusChronic Hepatitis B; HLA Antigen; Hepatitis C Virus
dc.subject.wosInfectious diseases
dc.titleAssociation of tnf-alpha-308 polymorphism with the outcome of hepatitis B virus infection in Turkey
dc.typeArticle
dc.wos.quartileQ2
dspace.entity.typePublication
local.contributor.departmentTıp Fakültesi/Mikrobiyoloji ve Enfeksiyon Hastalıkları Ana Bilim Dalı İmmünoloji Ünitesi
local.indexed.atPubMed
local.indexed.atWOS

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