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Structural, spectroscopic (FT-IR, NMR, UV-visible), nonlinear optical (NLO), cytotoxic and molecular docking studies of 4-nitro-isonitrosoacetophenone (ninapH) by DFT method

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Date

2017-03-07

Authors

Kaya, A. Aslı

Authors

Küçük, İlhan
Kaya, Yunus

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Elsevier

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Abstract

(4-Nitro-phenyl)-oxo-acetaldehyde oxime (ninapH) is a type of oxime, which has a oxime and alpha-carbonyl groups. This molecule has been synthesized from literature procedure. The structural properties and conformational behaviors were examined using the density functional theory (DFT) with the B3LYP method combined with the 6-311++G(d,p) basis set. As a result of the conformational studies, the most stable conformer was determined, and then this molecule was optimized with the same basis set. Comprehensive theoretical and experimental structural studies on the molecule have been carried out by FT-IR, NMR and UV-vis spectrometry. The calculated HOMO and LUMO energies show that charge transfer within the molecule. The first order hyperpolarizability and molecular electrostatic potential (MEP) were also performed. The thermodynamic properties (heat capacity, entropy, and enthalpy) of the ninapH have been calculated at different temperatures, 100-1000 K. In addition, the molecular docking studies have been, performed with DNA and protein structures (downloaded from Protein Data Bank).

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Keywords

Chemistry, Band gap, Carbonyloxime, DFT, Molecular docking, Nonlinear optics, Spectroscopy, Vibrational-spectra, Matrix-isolation, Ab-initio, Serum-albu, Minimine oxime, Gas-phase, Palladium(II), Complexes, Chemistry, Binding, Charge transfer, Conformations, Density functional theory, Energy gap, Molecular modeling, Molecules, Proteins, Specific heat, Spectroscopy, Synthesis (chemical), Carbonyloxime, Conformational behavior, Conformational study, First-order hyperpolarizability, HOMO and LUMO energies, Molecular docking, Molecular electrostatic potentials, Protein structures

Citation

Küçük, İ. vd. (2017). ''Structural, spectroscopic (FT-IR, NMR, UV-visible), nonlinear optical (NLO), cytotoxic and molecular docking studies of 4-nitro-isonitrosoacetophenone (ninapH) by DFT method''. Journal of Molecular Structure, 1139, 308-318.

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