Publication:
Development of EST based SSR markers for garlic genome

dc.contributor.authorSimon, Philipp W.
dc.contributor.authorWako, T.
dc.contributor.buuauthorİpek, Meryem
dc.contributor.buuauthorİpek, Ahmet
dc.contributor.buuauthorCansev, Asuman
dc.contributor.buuauthorŞeniz, Vedat
dc.contributor.departmentZiraat Fakültesi
dc.contributor.departmentBahçe Bitkileri Bölümü
dc.contributor.orcid0000-0002-3353-846X
dc.contributor.researcheridAAH-3233-2021
dc.contributor.researcheridAAH-4255-2019
dc.contributor.scopusid16031208900
dc.contributor.scopusid6603912487
dc.contributor.scopusid26326677200
dc.contributor.scopusid13604787100
dc.date.accessioned2022-04-14T08:14:47Z
dc.date.available2022-04-14T08:14:47Z
dc.date.issued2012
dc.descriptionBu çalışma, 21-24 May 2012 tarihleri arasında Fukuoka[Japonya]’da düzenlenen 6th International Symposium on Edible Alliaceae’da bildiri olarak sunulmuştur.
dc.description.abstractAlthough it is time consuming and expensive to develop SSR markers, they have some advantages such as co-dominancy, reproducibility and high amount of polymorphic alleles as a PCR based marker system. For genetic and molecular studies in garlic, generally RAPD and AFLP markers have been utilized. However, development and use of SSR markers have been limited to few studies. In order to develop detailed genetic map and genetic studies, co-dominant marker systems like SSRs and SNPs are necessary in garlic. The purpose of this study was the development of SSR markers from expressed sequence tags (ESTs) derived from the genome of garlic. The SSR motifs in EST sequences were screened and it was revealed that SSR motifs are abundant in garlic ESTs. So far six SSR markers have been developed. EST based SSR markers could be used to map genes to garlic genetic maps directly and assessment of genetic diversity for the expressed regions of the garlic genome.
dc.description.sponsorshipInt Soc Hort Sci (ISHS)
dc.identifier.citationİpek, M. vd. (2012). "Development of EST based SSR markers for garlic genome". ed. T. Wako. Acta Horticulturae, VI International Symposium on Edible Alliaceae, 969, 81-83.
dc.identifier.endpage83
dc.identifier.isbn978-90-66056-95-4
dc.identifier.issn0567-7572
dc.identifier.scopus2-s2.0-84872020691
dc.identifier.startpage81
dc.identifier.urihttps://www.actahort.org/books/969/969_7.htm
dc.identifier.urihttp://hdl.handle.net/11452/25777
dc.identifier.volume969
dc.identifier.wos000324531800007
dc.indexed.wosCPCIS
dc.language.isoen
dc.publisherInt Soc Horticultural Science
dc.relation.bapZ-2010/50
dc.relation.collaborationYurt dışı
dc.relation.journalActa Horticulturae, VI International Symposium on Edible Alliaceae
dc.relation.publicationcategoryKonferans Öğesi - Uluslararası
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectAgriculture
dc.subjectPlant sciences
dc.subjectAllium sativum
dc.subjectSimple sequence repeats
dc.subjectExpressed sequence tag
dc.subjectGenetic mapping
dc.subjectAllium-sativum l.
dc.subjectGenetic diversity
dc.subjectRapd markers
dc.subjectClones
dc.subjectAllium sativum
dc.subject.scopusGarlic; Allium Roseum; Bolting
dc.subject.wosAgronomy
dc.subject.wosPlant sciences
dc.subject.wosHorticulture
dc.titleDevelopment of EST based SSR markers for garlic genome
dc.typeProceedings Paper
dspace.entity.typePublication
local.contributor.departmentZiraat Fakültesi/Bahçe Bitkileri Bölümü
local.indexed.atScopus
local.indexed.atWOS

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