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Investigation of vancomycin resistant Enterococcus faecium outbreak in neonatal intensive care unit

dc.contributor.buuauthorCilo, Burcu Dalyan
dc.contributor.buuauthorAǧca, Harun
dc.contributor.buuauthorEfe, Kadir
dc.contributor.buuauthorSınırtaş, Melda
dc.contributor.buuauthorÇelebi, Solmaz
dc.contributor.buuauthorÖzkan, Hilal
dc.contributor.buuauthorKöksal, Nilgün
dc.contributor.buuauthorHacımustafaoğlu, Mustafa Kemal
dc.contributor.buuauthorÖzakın, Cüneyt
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentÇocuk Enfeksiyon Hastalıkları Ana Bilim Dalı
dc.contributor.departmentÇocuk Sağlığı ve Hastalıkları Ana Bilim Dalı
dc.contributor.departmentTıbbi Mikrobiyoloji Ana Bilim Dalı
dc.contributor.departmentPediatri Ana Bilim Dalı
dc.contributor.departmentNeonatoloji Ana Bilim Dalı
dc.contributor.orcid0000-0001-5428-3630
dc.contributor.orcid0000-0002-2651-2034
dc.contributor.researcheridAAH-4027-2021
dc.contributor.researcheridAAG-8392-2021
dc.contributor.scopusid56364338600
dc.contributor.scopusid15759379900
dc.contributor.scopusid56490687400
dc.contributor.scopusid6505818048
dc.contributor.scopusid7006095295
dc.contributor.scopusid16679325400
dc.contributor.scopusid7003323615
dc.contributor.scopusid6602154166
dc.contributor.scopusid57200678942
dc.date.accessioned2024-02-19T10:27:21Z
dc.date.available2024-02-19T10:27:21Z
dc.date.issued2014
dc.description.abstractEnterococci are one of the major agents of community-acquired and nosocomial infections. In this study we aimed to analyze the clonal relation of the vancomycin-resistant Enterococci outbreak seen at the Neonate Intensive Care Unit (NICU) of Uludag University Hospital. Vancomycin resistance gene was investigated in the Enterococcus faecium strains and pulsed field gel electrophoresis (PFGE) was used to investigate the genetic relation between outbreak strains. Enterococci grown in all patient samples were identified as Enterococcus faecium by BD Phoenix 100 (Becton Dickinson, USA). We found vanA resistance gene in all of the swab samples by Xpert VanA/B test on Cepheid (Cepheid, USA). PFGE band patterns revealed two different strains, of which the majority of them (22/24) had the same clonal origin. The common clonal origin was also isolated from rectal probes. Perianal swab culture positivity was evaluated as colonization but culture growth in two blood cultures, two urine cultures and one wound culture was evaluated as infection and treated with linezolid. All of the patients survived the outbreak. Besides the infection control precautions determining the genetic relation between outbreak strains which can be done in the microbiology laboratory is necessary to control an outbreak. PFGE is a reliable method in the microbiologic analysis of outbreaks. Molecular microbiologic analysis of outbreak strains will contribute to prove the epidemiologic and evolution of outbreaks.
dc.identifier.citationCilo, B. D. vd. (2014). "Investigation of vancomycin resistant Enterococcus faecium outbreak in neonatal intensive care unit". International Journal of Clinical and Experimental Medicine, 7(12), 5342-5347.
dc.identifier.endpage5347
dc.identifier.issn1940-5901
dc.identifier.issue12
dc.identifier.pubmed25664041
dc.identifier.scopus2-s2.0-84921510672
dc.identifier.startpage5342
dc.identifier.urihttps://hdl.handle.net/11452/39847
dc.identifier.volume7
dc.identifier.wos000348303600084
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherE-century Publishing Corp
dc.relation.journalInternational Journal of Clinical and Experimental Medicine
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectEnterococcus
dc.subjectPFGE
dc.subjectNeonatal
dc.subjectOutbreak
dc.subjectEnterococcus faecium
dc.subjectResearch & experimental medicine
dc.subjectField gel-electrophoresis
dc.subjectSequence-based pcr
dc.subjectRisk-factors
dc.subject.emtreeAntibiotic resistance
dc.subject.emtreeArticle
dc.subject.emtreeBacterial colonization
dc.subject.emtreeBacterial strain
dc.subject.emtreeBacterium detection
dc.subject.emtreeBlood culture
dc.subject.emtreeClinical article
dc.subject.emtreeEnterococcal infection
dc.subject.emtreeEnterococcus faecium
dc.subject.emtreeEpsilometer test
dc.subject.emtreeGenetic susceptibility
dc.subject.emtreeHuman
dc.subject.emtreeNewborn
dc.subject.emtreeNewborn intensive care
dc.subject.emtreeNonhuman
dc.subject.emtreePulsed field gel electrophoresis
dc.subject.emtreeReal time polymerase chain reaction
dc.subject.emtreeUrine culture
dc.subject.emtreeVancomycin resistant enterococcus
dc.subject.emtreeWound
dc.subject.emtreeAmpicillin
dc.subject.emtreeDalfopristin plus quinupristin
dc.subject.emtreeDaptomycin
dc.subject.emtreeLinezolid
dc.subject.emtreeTeicoplanin
dc.subject.emtreeVancomycin
dc.subject.scopusVancomycin Resistant Enterococcus; Enterococcus Faecium; Anti-Bacterial Agents
dc.subject.wosMedicine, research & experimental
dc.titleInvestigation of vancomycin resistant Enterococcus faecium outbreak in neonatal intensive care unit
dc.typeArticle
dc.wos.quartileQ4 (Medicine, Research & Experimental)
dspace.entity.typePublication
local.contributor.departmentTıp Fakültesi/Tıbbi Mikrobiyoloji Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Çocuk Enfeksiyon Hastalıkları Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Çocuk Sağlığı ve Hastalıkları Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Neonatoloji Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Pediatri Ana Bilim Dalı
local.indexed.atWOS
local.indexed.atScopus
local.indexed.atPubMed

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