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Isolation of Citrobacter braakii from rainbow trout (Oncorhynchus mykiss)

dc.contributor.authorKarataş, Süheyla
dc.contributor.authorTurgay, Emre
dc.contributor.buuauthorAltun, Soner
dc.contributor.buuauthorDuman, Muhammed
dc.contributor.buuauthorBüyükekiz, Ayşe Gül
dc.contributor.buuauthorÖzyiǧit, Musa Özgür
dc.contributor.departmentVeterinerlik Fakültesi
dc.contributor.departmentVeterinerlik Fakültesi
dc.contributor.departmentSu Hastalıkları Ana Bilim Dalı
dc.contributor.departmentPatoloji Ana Bilim Dalı
dc.contributor.orcid0000-0001-9096-875X
dc.contributor.orcid0000-0001-7707-2705
dc.contributor.researcheridAAG-8518-2021
dc.contributor.researcheridT-1697-2019
dc.contributor.researcheridAAR-6478-2021
dc.contributor.researcheridAAH-2873-2021
dc.contributor.scopusid56269221600
dc.contributor.scopusid55568071100
dc.contributor.scopusid55567777200
dc.contributor.scopusid6507338060
dc.date.accessioned2023-05-18T11:26:05Z
dc.date.available2023-05-18T11:26:05Z
dc.date.issued2013
dc.description.abstractAbout 100 moribund rainbow trout fry (2-3 g) were brought to the laboratory for examination after an epizootic of citrobacteriosis on a farm in Bursa Province, northwest Turkey, in late March 2012. The dominant bacterium was identified by biochemical, API 20E, and VITEK II rapid tests. Colonies grown on xylose lysine deoxycholate (XLD) agar were yellow with an intensive yellow center and a surrounding zone of yellow precipitation. The fish displayed hyperemia of the mouth, dark color, bilateral exophthalmia, pale liver, and necrotic kidney symptoms. The possible etiologic agent was identified by 16S rRNA gene sequencing as Citrobacter braakii (GenBank accession number JX518488). Histopathological examination of the diseased fish revealed vacuolar degeneration in the liver epithelium, round and limited focal necrotic areas in the liver, desquamation in the intestine epithelium and glands that settled in the propria mucosa, and vacuolar degeneration of the intestinal epithelium. According to ATB VET and antibiogram disc diffusion, the isolated C. braakii strain was sensitive to apramycin, cefoperazone, chloramphenicol, colistin, gentamicin, nitrofurantoin, spectinomycin, and streptomycin but resistant to amoxicillin, amoxicillin/clavulanic acid, cefalotine, cotrimoxazole, enrofloxacin, erythromycin, florfenicol, flumequine, fusidic acid, kanamycin, lincomycin, metronidazole, neomycin, oxacilline, oxolinic acid, oxytetracycline, penicillin, pristinamycin, rifampicin, sulfamethizole, sulfamethoxazole-trimethoprim, tetracycline, and tylosin. We found the bacteria sensitive to 4 mg/l doxycycline in the ATB VET test strip but resistant to 30 mu g/l doxycycline in the antibiogram disc diffusion test.
dc.identifier.citationZengin, S. vd. (2013). “Isolation of Citrobacter braakii from rainbow trout (Oncorhynchus mykiss)”. Israeli Journal of Aquaculture - Bamidgeh, 65(1).
dc.identifier.issn0792-156X
dc.identifier.issue1
dc.identifier.scopus2-s2.0-84879314535
dc.identifier.urihttp://hdl.handle.net/11452/32715
dc.identifier.volume65
dc.identifier.wos000320705200001
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherIsraeli Journal of Aquaculture-Bamidgeh
dc.relation.collaborationYurt içi
dc.relation.journalIsraeli Journal of Aquaculture - Bamidgeh
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectFisheries
dc.subjectCitrobacter braakii
dc.subjectOncorhynchus mykiss
dc.subjectPCR
dc.subjectSequencing
dc.subjectFreundii infection
dc.subjectDna hybridization
dc.subjectSp-nov
dc.subjectBursa [Turkey]
dc.subjectTurkey
dc.subjectBacteria (microorganisms)
dc.subjectCitrobacter
dc.subjectCitrobacter braakii
dc.subjectOncorhynchus mykiss
dc.subjectAgar
dc.subjectBacterium
dc.subjectBiochemistry
dc.subjectHistopathology
dc.subjectPolymerase chain reaction
dc.subjectRna
dc.subjectSalmonid
dc.subject.scopusCitrobacter Freundii; Norfloxacin; Aquaculture
dc.subject.wosFisheries
dc.titleIsolation of Citrobacter braakii from rainbow trout (Oncorhynchus mykiss)
dc.typeArticle
dc.wos.quartileQ4
dspace.entity.typePublication
local.contributor.departmentVeterinerlik Fakültesi/Su Hastalıkları Ana Bilim Dalı
local.contributor.departmentVeterinerlik Fakültesi/Patoloji Ana Bilim Dalı
local.indexed.atScopus
local.indexed.atWOS

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