Publication:
Infectious pancreatic necrosis virus (IPNV) serotype Sp is prevalent in Turkish rainbow trout farms

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dc.contributor.authorHansen, E. F.
dc.contributor.authorMarkussen, T.
dc.contributor.authorRimstad, E.
dc.contributor.buuauthorBüyükekiz, Ayşe Gül
dc.contributor.buuauthorAltun, Soner
dc.contributor.buuauthorSatıcıoğlu, İzzet Burçin
dc.contributor.buuauthorDuman, Muhammed
dc.contributor.departmentVeterinerlik Fakültesi
dc.contributor.departmentSu Hayvanları Hastalıkları Bölümü
dc.contributor.orcid0000-0001-9096-875X
dc.contributor.orcid0000-0002-2721-3204
dc.contributor.orcid0000-0001-7707-2705
dc.contributor.researcheridJIH-9655-2023
dc.contributor.researcheridAAG-8518-2021
dc.contributor.researcheridAAD-4156-2019
dc.contributor.researcheridT-1697-2019
dc.contributor.scopusid55567777200
dc.contributor.scopusid56269221600
dc.contributor.scopusid57194590388
dc.contributor.scopusid55568071100
dc.date.accessioned2024-04-01T10:44:39Z
dc.date.available2024-04-01T10:44:39Z
dc.date.issued2018-01
dc.description.abstractInfectious pancreatic necrosis virus (IPNV) is a common pathogen of rainbow trout (Oncorhynchus mykiss) in Turkey. We found that 455 of 1,676 sample pools tested were IPNV positive. Positive samples were found in all geographical regions where sampling was conducted. Sequence and phylogenetic analyses of VP2 from 30 isolates representing all regions showed that the viruses were highly similar in sequence and grouped within Genogroup 5 (serotype Sp-A2). No correlations between sequences, sampling sites or geographical origins were identified. Although clinical disease was evident in several farms, analyses of the amino acid sequence of VP2 showed that all virus strains harboured the P217T221 motif, assumed to be associated with low virulence. We conclude that IPNV is prevalent in Turkish rainbow trout farms and that the viruses are very homogenous and likely to be of European origin. Frequent exchange of eggs and live fish within the farming industry may explain the homogeneity of the IPNV.
dc.description.sponsorshipGıda Tarım ve Hayvancılık Bakanlığı (14/AR-GE/26)
dc.identifier.citationBüyükekiz, A. G. vd. (2018). ''Infectious pancreatic necrosis virus (IPNV) serotype Sp is prevalent in Turkish rainbow trout farms''. Journal of Fish Diseases, 41(1), 95-104.
dc.identifier.doihttps://doi.org/10.1111/jfd.12675
dc.identifier.endpage104
dc.identifier.issn0140-7775
dc.identifier.issn1365-2761
dc.identifier.issue1
dc.identifier.pubmed28745835
dc.identifier.scopus2-s2.0-85026291096
dc.identifier.startpage95
dc.identifier.urihttps://onlinelibrary.wiley.com/doi/10.1111/jfd.12675
dc.identifier.urihttps://hdl.handle.net/11452/40888
dc.identifier.volume41
dc.identifier.wos000418245400011
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherWiley
dc.relation.collaborationYurt dışı
dc.relation.journalJournal of Fish Diseases
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.relation.tubitak2214/a - 1059B141500122
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectFisheries
dc.subjectMarine & freshwater biology
dc.subjectVeterinary sciences
dc.subjectInfectious pancreatic necrosis virus
dc.subjectIPNV
dc.subjectPhylogenetic characterization
dc.subjectGenotypes
dc.subjectRainbow trout
dc.subjectAmino-acid-sequences
dc.subjectGenome segment
dc.subjectOncorhynchus-mykiss
dc.subjectAtlantic salmon
dc.subjectMoleculer characterization
dc.subjectPhylogenetic-relationships
dc.subjectGenetic diversity
dc.subjectRNA-polymerase
dc.subjectCell-culture
dc.subjectVirulence
dc.subject.emtreeAbdominal swelling
dc.subject.emtreeAgricultural land
dc.subject.emtreeAgricultural worker
dc.subject.emtreeAmino acid sequence
dc.subject.emtreeArticle
dc.subject.emtreeAscites
dc.subject.emtreeControlled study
dc.subject.emtreeEnzyme linked immunosorbent assay
dc.subject.emtreeExophthalmos
dc.subject.emtreeInfectious pancreatic necrosis virus
dc.subject.emtreeLoss of appetite
dc.subject.emtreeMicrobiological examination
dc.subject.emtreeNonhuman
dc.subject.emtreeOncorhynchus mykiss
dc.subject.emtreePhylogenetic tree
dc.subject.emtreePrevalence
dc.subject.emtreeQuantitative analysis
dc.subject.emtreeReal time polymerase chain reaction
dc.subject.emtreeSequence alignment
dc.subject.emtreeSerotype
dc.subject.emtreeTurkey (republic)
dc.subject.emtreeVirus strain
dc.subject.emtreeVirus virulence
dc.subject.emtreeAnimal
dc.subject.emtreeAquaculture
dc.subject.emtreeBirnavirus infection
dc.subject.emtreeFish disease
dc.subject.emtreeGenetics
dc.subject.emtreeInfectious pancreatic necrosis virus
dc.subject.emtreeIsolation and purification
dc.subject.emtreeOncorhynchus mykiss
dc.subject.emtreePhylogeny
dc.subject.emtreeProtein motif
dc.subject.emtreeSerotype
dc.subject.emtreeTurkey (bird)
dc.subject.emtreeVeterinary medicine
dc.subject.emtreeVirology
dc.subject.meshAmino acid motifs
dc.subject.meshAmino acid sequence
dc.subject.meshAnimals
dc.subject.meshAquaculture
dc.subject.meshBirnaviridae infections
dc.subject.meshFish diseases
dc.subject.meshInfectious pancreatic necrosis virus
dc.subject.meshOncorhynchus mykiss
dc.subject.meshPhylogeny
dc.subject.meshSerogroup
dc.subject.meshTurkey
dc.subject.scopusFish; Birnaviridae; Alloherpesviridae
dc.subject.wosFisheries
dc.subject.wosMarine & freshwater biology
dc.subject.wosVeterinary sciences
dc.titleInfectious pancreatic necrosis virus (IPNV) serotype Sp is prevalent in Turkish rainbow trout farms
dc.typeArticle
dspace.entity.typePublication
local.contributor.departmentVeterinerlik Fakültesi/Su Hayvanları Hastalıkları Bölümü
local.indexed.atPubMed
local.indexed.atWOS

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