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DNA binding and cleavage studies of two palladium(II) saccharinate complexes with terpyridine

dc.contributor.buuauthorİçsel, Ceyda
dc.contributor.buuauthorYılmaz, Veysel Turan
dc.contributor.departmentFen Edebiyat Fakültesi
dc.contributor.departmentKimya Ana Bilim Dalı
dc.contributor.orcid0000-0002-2849-3332
dc.contributor.orcid0000-0002-2717-2430
dc.contributor.researcheridL-7238-2018
dc.contributor.researcheridAAI-3342-2021
dc.contributor.scopusid7006269202
dc.contributor.scopusid55551960400
dc.date.accessioned2022-10-06T07:46:55Z
dc.date.available2022-10-06T07:46:55Z
dc.date.issued2013-04
dc.description.abstractThe aim of the present study is to investigate DNA binding interactions of two highly cytotoxic palladium(II) saccharinate (sac) complexes with 2,2':6',2 ''-terpyridine (terpy), [Pd(sac)(terpy)](sac)center dot 4H(2)O (1) and [PdCl (terpy)](sac)center dot 2H(2)O (2). UV-Vis spectroscopy, fluorescence spectroscopy, thermal denaturation, viscosity, and gel electrophoresis measurements were employed to study binding properties of the two complexes with Fish Sperm (FS) DNA. The interaction of the palladium(II) complexes with FS-DNA was monitored by hypochromism in the UV-Vis spectra. The binding constants (K-b) obtained from absorption titrations were estimated to be 1.0 (+/- 0.05) x 10(5) M-1 for 1 and 2.0 (+/- 0.22) x 10(5) M-1 for 2. Competitive binding studies with ethidium bromide have shown that both complexes strongly bind to FS-DNA, and the apparent binding constant (K-app) calculated from emission studies was 2.0 x 10(6) M-1 for each complex. Fluorescence Scatchard plots demonstrated that the palladium(II) complexes act as dual-function metallointercalators and bind to FS-DNA by both intercalation and coordination. On addition of the two complexes, significant increases in both viscosity and melting temperature of FS-DNA solutions further support the binding mode of these complexes. Gel electrophoresis assay demonstrates that both complexes efficiently cleavage the supercoiled plasmid 8454: pCMV-VSV-G DNA to its open circular form.
dc.identifier.citationİçsel, C. ve Yılmaz, V. T. (2011). "DNA binding and cleavage studies of two palladium(II) saccharinate complexes with terpyridine". DNA and Cell Biology, 32(4), 165-172.
dc.identifier.doi10.1089/dna.2012.1959
dc.identifier.endpage172
dc.identifier.issn1044-5498
dc.identifier.issn1557-7430
dc.identifier.issue4
dc.identifier.pubmed23473538
dc.identifier.scopus2-s2.0-84876143524
dc.identifier.startpage165
dc.identifier.urihttps://doi.org/10.1089/dna.2012.1959
dc.identifier.urihttps://www.liebertpub.com/doi/10.1089/dna.2012.1959
dc.identifier.urihttp://hdl.handle.net/11452/28993
dc.identifier.volume32
dc.identifier.wos000317406900005
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherMary Ann Liebert
dc.relation.bapBAP
dc.relation.journalDNA and Cell Biology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectBiochemistry & molecular biology
dc.subjectCell biology
dc.subjectGenetics & heredity
dc.subjectCells in-vitro
dc.subjectPlatinum(II) complexes
dc.subjectThermal-properties
dc.subjectNucleic-acids
dc.subjectMetallointercalation reagents
dc.subjectRuthenium(II) complexes
dc.subjectDeoxyribonucleic-acid
dc.subjectCrystal-structures
dc.subjectEthidium bromide
dc.subjectMetal-complexes
dc.subjectVesicular stomatitis virus
dc.subject.emtreeEthidium bromide
dc.subject.emtreePalladium
dc.subject.emtreePyridine
dc.subject.emtreeSaccharin sodium
dc.subject.emtreeTerpyridine
dc.subject.emtreeUnclassified drug
dc.subject.emtreeArticle
dc.subject.emtreeBinding affinity
dc.subject.emtreeChemical structure
dc.subject.emtreeDNA binding
dc.subject.emtreeDNA cleavage
dc.subject.emtreeDNA denaturation
dc.subject.emtreeFluorescence spectroscopy
dc.subject.emtreeGel electrophoresis
dc.subject.emtreePriority journal
dc.subject.emtreeTemperature
dc.subject.emtreeUltraviolet spectroscopy
dc.subject.emtreeViscosity
dc.subject.meshAnimals
dc.subject.meshCrystallography, x-ray
dc.subject.meshDNA
dc.subject.meshEthidium
dc.subject.meshFishes
dc.subject.meshMale
dc.subject.meshModels, molecular
dc.subject.meshMolecular structure
dc.subject.meshOrganometallic compounds
dc.subject.meshPalladium
dc.subject.meshPlasmids
dc.subject.meshPyridines
dc.subject.meshSaccharin
dc.subject.meshSpectrometry, fluorescence
dc.subject.meshSpermatozoa
dc.subject.meshTemperature
dc.subject.meshViscosity
dc.subject.scopusComplex; Palladium; 2-Phenylpyridine
dc.subject.wosBiochemistry & molecular biology
dc.subject.wosCell biology
dc.subject.wosGenetics & heredity
dc.titleDNA binding and cleavage studies of two palladium(II) saccharinate complexes with terpyridine
dc.typeArticle
dc.wos.quartileQ3
dc.wos.quartileQ4 (Cell biology)
dspace.entity.typePublication
local.contributor.departmentFen Edebiyat Fakültesi/Kimya Ana Bilim Dalı
local.indexed.atPubMed
local.indexed.atWOS

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