Publication:
Assessment of genetic relationship among male and female fig genotypes using simple sequence repeat (SSR) markers

dc.contributor.authorTangu, Nesrin Aktepe
dc.contributor.authorDurgut, Erdem
dc.contributor.authorErcişli, Sezai
dc.contributor.buuauthorTeoman, Sevin
dc.contributor.buuauthorİpek, Bayram
dc.contributor.buuauthorErtürk, Ümran
dc.contributor.buuauthorBarut, Erdoğan
dc.contributor.buuauthorİpek, Ahmet
dc.contributor.departmentZiraat Fakültesi
dc.contributor.departmentBahçe Bitkileri Bölümü
dc.contributor.orcid0000-0003-1469-6777
dc.contributor.researcheridAAE-4675-2019
dc.contributor.researcheridAAH-3233-2021
dc.contributor.researcheridAAG-7343-2021
dc.contributor.researcheridAAE-6913-2019
dc.contributor.researcheridAAH-2551-2021
dc.contributor.scopusid57194462289
dc.contributor.scopusid16031208900
dc.contributor.scopusid7801661220
dc.contributor.scopusid26657823900
dc.contributor.scopusid6603912487
dc.date.accessioned2023-03-31T07:10:31Z
dc.date.available2023-03-31T07:10:31Z
dc.date.issued2017-04-05
dc.descriptionGıda Tarım Ve Hayvancılık Bakanlığı TAGEM-14/AR-GE/03
dc.description.abstractFig (Ficus carica L.) is a traditional crop in Turkey and widely cultivated around the Mediterranean areas. The gynodioecious fig species is present in two sexual forms, i.e. the domesticated fig (female tree) and the caprifig (male tree). Caprifigs are crucial for high quality fig production and breeding while, the studies on assessment of genetic relationship among caprifigs is limited. The aim of this study was to determine genetic diversity among 45 caprifigs and 2 female figs collected from four provinces in Marmara and Aegean Sea Regions of Turkey using simple sequence repeat (SSR) markers. In this work, 24 SSR markers were tested, one was monomorphic and the remaining markers amplified 82 alleles. The number of polymorphic alleles per SSR marker ranged from 2 to 7. The observed heterozygosity (Ho) differed from 0.18 to 0.76 and expected heterozygosity (He) ranged between 0.24 and 0.81. The polymorphism information content (PIC) varied from 0.42 to 0.98. A UPGMA analysis based on Dice similarity matrix clustered fig genotypes into two main groups and similarly, STRUCTURE analysis placed fig genotypes into two different gene pools (K=2). Fig genotypes collected from the same region were not clustered together in a group indicating that the fig genotypes did not cluster on the basis of their collection sites. Our results demonstrated that caprifigs and female figs are not genetically distinct and they clustered together in a group. All fig genotypes had distinct SSR marker profiles suggesting that there were no synonyms or homonyms. These results revealed a high genetic variation among fig genotypes and 23 SSR markers were enough to discriminate all fig genotypes analysed in this study demonstrating that SSR marker system is suitable for genetic analysis in figs.
dc.identifier.citationTeoman, S. vd. (2017). ''Assessment of genetic relationship among male and female fig genotypes using simple sequence repeat (SSR) markers''. Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 45(1), 172-178.
dc.identifier.endpage178
dc.identifier.issn0255-965X
dc.identifier.issn1842-4309
dc.identifier.issue1
dc.identifier.scopus2-s2.0-85020307052
dc.identifier.startpage172
dc.identifier.urihttps://doi.org/10.15835/nbha45110756
dc.identifier.urihttps://www.notulaebotanicae.ro/index.php/nbha/article/view/10756
dc.identifier.urihttp://hdl.handle.net/11452/32105
dc.identifier.volume45
dc.identifier.wos000403394200023
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherUniv Agr Sci & Veterinary Med Cluj-Napoca
dc.relation.collaborationSanayi
dc.relation.collaborationYurt içi
dc.relation.journalNotulae Botanicae Horti Agrobotanici Cluj-Napoca
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectPlant sciences
dc.subjectCaprifig
dc.subjectFicus carica L.
dc.subjectGenetic variation
dc.subjectSSR marker
dc.subjectSTRUCTURE analysis
dc.subjectFicus-carica l.
dc.subjectCommon fig
dc.subjectMicrosatellite markers
dc.subjectDiversity
dc.subjectIdentification
dc.subjectCultivars
dc.subjectGermplasm
dc.subjectFruit
dc.subjectRapd
dc.subjectDifferentiation
dc.subject.scopusCultivar; Blastophaga; Smyrna
dc.subject.wosPlant sciences
dc.titleAssessment of genetic relationship among male and female fig genotypes using simple sequence repeat (SSR) markers
dc.typeArticle
dc.wos.quartileQ4
dspace.entity.typePublication
local.contributor.departmentZiraat Fakültesi/Bahçe Bitkileri Bölümü
local.indexed.atScopus
local.indexed.atWOS

Files

Original bundle

Now showing 1 - 1 of 1
Thumbnail Image
Name:
Teoman_vd_2017.pdf
Size:
841.15 KB
Format:
Adobe Portable Document Format
Description:

License bundle

Now showing 1 - 1 of 1
Placeholder
Name:
license.txt
Size:
1.71 KB
Format:
Item-specific license agreed upon to submission
Description: