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Biochemical and proteomic analysis of a potential anticancer agent: Palladium(II) saccharinate complex of terpyridine acting through double strand break formation

dc.contributor.authorAdıgüzel, Zelal
dc.contributor.authorTarık, Ahmet Baykal
dc.contributor.authorKaçar, Ömer
dc.contributor.authorAçılan, Ceyda
dc.contributor.buuauthorYılmaz, Veysel Turan
dc.contributor.buuauthorUlukaya, Engin
dc.contributor.departmentFen Edebiyat Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentKimya Bölümü
dc.contributor.departmentTıbbi Biyokimya Ana Bilim Dalı
dc.contributor.orcid0000-0002-2849-3332
dc.contributor.researcheridK-5792-2018
dc.contributor.researcheridL-7238-2018
dc.contributor.scopusid7006269202
dc.contributor.scopusid6602927353
dc.date.accessioned2022-09-06T12:31:19Z
dc.date.available2022-09-06T12:31:19Z
dc.date.issued2014-11
dc.description.abstractMetal based chemotherapeutic drugs are widely used as an effective method to defeat various cancers. In this study, the mechanism of action of a novel therapeutic agent, [Pd(sac)(terpy)](sac)center dot 4H(2)O (sac = saccharinate, and terpy = 2,2':6',2 ''-terpyridine) was studied. To better understand the proteomic changes in response to this agent, we performed nano LC-MS/MS analyses in human breast cancer cells (MDA-MB-231). Thirty proteins were identified to be differentially expressed more than 40% after drug treatment. Many cellular pathways were affected, including proteins involved in DNA repair, apoptosis, energy metabolism, protein folding, cytoskeleton, pre-mRNA maturation, or protein translation. The changes in protein expression were further verified for XRCC5, which plays a role in double strand break (DSB) repair, and ubiquitin, which is involved in protein degradation and apoptosis. The elevated XRCC5 levels were suggestive of increased DSBs. The presence of DSBs was confirmed by smearing of plasmid DNA in vitro and induction of gamma H2AX foci in vivo. There was also increased intracellular reactive oxygen species (ROS) formation, as detected by 2',7'-dichlorofluorescein diacetate (DCFDA) staining. Scavenging ROS by N-acetylcysteine rescued cell death in response to Pd(II) treatment, potentially explaining how the Pd(II) complex damaged the DNA. The details of this analysis and the significance will be discussed during the scope of this work.
dc.identifier.citationAdıgüzel, Z. vd. (2014). "Biochemical and proteomic analysis of a potential anticancer agent: Palladium(II) saccharinate complex of terpyridine acting through double strand break formation". Journal of Proteome Research, 13(11), 5240-5249.
dc.identifier.doi10.1021/pr5006718
dc.identifier.endpage5249
dc.identifier.issn1535-3893
dc.identifier.issn1535-3907
dc.identifier.issue11
dc.identifier.pubmed25210790
dc.identifier.scopus2-s2.0-84908868909
dc.identifier.startpage5240
dc.identifier.urihttps://doi.org/10.1021/pr5006718
dc.identifier.urihttps://pubs.acs.org/doi/10.1021/pr5006718
dc.identifier.urihttp://hdl.handle.net/11452/28501
dc.identifier.volume13
dc.identifier.wos000344636500065
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherAmer Chemical
dc.relation.collaborationYurt içi
dc.relation.collaborationSanayi
dc.relation.journalJournal of Proteome Research
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectPalladium(II) saccharinate complex with terpyridine
dc.subjectAnticancer drugs
dc.subjectDNA double strand breaks
dc.subjectReactive oxygen species
dc.subjectNonhomologous end joining
dc.subjectApoptosis
dc.subjectProteomics
dc.subjectCancer-cells
dc.subjectStatistical-model
dc.subjectPlatinum(II)
dc.subjectProteins
dc.subjectBiochemistry & molecular biology
dc.subject.emtreeAcetylcysteine
dc.subject.emtreeAntineoplastic agent
dc.subject.emtreeCisplatin
dc.subject.emtreeHistone H2AX
dc.subject.emtreeMessenger RNA precursor
dc.subject.emtreePalladium complex
dc.subject.emtreePalladium saccharinate
dc.subject.emtreePlasmid DNA
dc.subject.emtreeReactive oxygen metabolite
dc.subject.emtreeSaccharin sodium
dc.subject.emtreeUbiquitin C
dc.subject.emtreeUnclassified drug
dc.subject.emtreeXRCC5 protein
dc.subject.emtreeAntineoplastic agent
dc.subject.emtreeCoordination compound
dc.subject.emtreeDNA helicase
dc.subject.emtreePalladium
dc.subject.emtreeReactive oxygen metabolite
dc.subject.emtreeSaccharinate(2,2'-6',2'-terpyridine)palladium(II)
dc.subject.emtreeXRCC5 protein
dc.subject.emtreeHuman
dc.subject.emtreeApoptosis
dc.subject.emtreeArticle
dc.subject.emtreeBiochemistry
dc.subject.emtreeBreast cancer cell line
dc.subject.emtreeCell death
dc.subject.emtreeCell viability
dc.subject.emtreeControlled study
dc.subject.emtreeCytoskeleton
dc.subject.emtreeDNA repair
dc.subject.emtreeDouble stranded DNA break
dc.subject.emtreeDrug mechanism
dc.subject.emtreeEnergy metabolism
dc.subject.emtreeHuman
dc.subject.emtreeIn vitro study
dc.subject.emtreeIn vivo study
dc.subject.emtreeLiquid chromatography
dc.subject.emtreeNucleotide sequence
dc.subject.emtreeOxidative stress
dc.subject.emtreeProtein analysis
dc.subject.emtreeProtein degradation
dc.subject.emtreeProtein expression
dc.subject.emtreeProtein folding
dc.subject.emtreeProteomics
dc.subject.emtreeTandem mass spectrometry
dc.subject.emtreeBreast neoplasms
dc.subject.emtreeChemistry
dc.subject.emtreeDouble stranded DNA break
dc.subject.emtreeDrug effects
dc.subject.emtreeFemale
dc.subject.emtreeHeLa cell line
dc.subject.emtreeMetabolism
dc.subject.emtreePathology
dc.subject.emtreeProcedures
dc.subject.emtreeProteomics
dc.subject.emtreeTumor cell line
dc.subject.meshAntineoplastic agents
dc.subject.meshBreast neoplasms
dc.subject.meshCell line, tumor
dc.subject.meshCoordination complexes
dc.subject.meshDNA breaks, double-stranded
dc.subject.meshDNA helicases
dc.subject.meshFemale
dc.subject.meshHeLa cells
dc.subject.meshHumans
dc.subject.meshPalladium
dc.subject.meshProteomics
dc.subject.meshReactive oxygen species
dc.subject.meshTandem mass spectrometry
dc.subject.scopusComplex; Palladium; 2-Phenylpyridine
dc.subject.wosBiochemical research methods
dc.titleBiochemical and proteomic analysis of a potential anticancer agent: Palladium(II) saccharinate complex of terpyridine acting through double strand break formation
dc.typeArticle
dc.wos.quartileQ1
dspace.entity.typePublication
local.contributor.departmentFen Edebiyat Fakültesi/Kimya Bölümü
local.contributor.departmentTıp Fakültesi/Tıbbi Biyokimya Ana Bilim Dalı
local.indexed.atScopus
local.indexed.atWOS

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