Publication:
The detection of hipO gene by real-time PCR in thermophilic Campylobacter spp. with very weak and negative reaction of hippurate hydrolysis

dc.contributor.authorÇokal, Yavuz
dc.contributor.authorKaragenç, Nedim
dc.contributor.authorCaner, Vildan
dc.contributor.buuauthorÇetin, Cengiz
dc.contributor.buuauthorŞen, Ayşin
dc.contributor.departmentVeteriner Fakültesi
dc.contributor.departmentMikrobiyoloji Ana Bilim Dalı
dc.contributor.orcid0000-0002-9212-8743
dc.contributor.researcherid7401592869
dc.contributor.scopusid7003489234
dc.contributor.scopusid7401592869
dc.date.accessioned2024-04-04T12:03:52Z
dc.date.available2024-04-04T12:03:52Z
dc.date.issued2008-11
dc.description.abstractA total of 190 Campylobacter spp. isolates, of which 34 gave the result of very weak activity, and 156 gave the negative activity in the test for hippurate hydrolysis were characterized. The genomic DNA was isolated from a fresh culture of each isolate and the real-time PCR, targeting the hipO gene, was used to confirm the species distribution of Campylobacter isolates. The hipO gene was detected in 17 isolates (11%) within the total of 156 negative isolates for hippurate hydrolysis. Out of 34 isolates with very weak activity, 19 isolates (56%) were also found to be positive for hipO gene and characterized as C. jejuni. The real-time PCR assay used in this study could be employed for more accurate diagnosis of Campylobacter infections at species level after the biochemical characterization based on hippuricase activity of the isolates. This could also provide important data for the epidemiology of infections associated with these zoonotic pathogens.
dc.identifier.citationCaner, V. vd. (2008). "The detection of hipO gene by real-time PCR in thermophilic Campylobacter spp. with very weak and negative reaction of hippurate hydrolysis". Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 94(4), 527-532.
dc.identifier.endpage532
dc.identifier.issn0003-6072
dc.identifier.issn1572-9699
dc.identifier.issue4
dc.identifier.pubmed18665452
dc.identifier.scopus2-s2.0-53349160006
dc.identifier.startpage527
dc.identifier.urihttps://doi.org/10.1007/s10482-008-9269-4
dc.identifier.urihttps://link.springer.com/article/10.1007/s10482-008-9269-4
dc.identifier.urihttps://hdl.handle.net/11452/41032
dc.identifier.volume94
dc.identifier.wos000259670400003
dc.indexed.scopusScopus
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherSpringer
dc.relation.collaborationYurt içi
dc.relation.journalAntonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.relation.tubitak104T242
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectCampylobacter
dc.subjectCampylobacter jejuni
dc.subjectCampylobacter
dc.subjectHipO
dc.subjectReal-time PCR
dc.subjectIdentification
dc.subjectJejuni
dc.subjectColi
dc.subjectPoultry
dc.subjectTests
dc.subjectMicrobiology
dc.subject.emtreeAminoacylase
dc.subject.emtreeBacterial DNA
dc.subject.emtreeBacterial protein
dc.subject.emtreeGenomic DNA
dc.subject.emtreeHippuric acid
dc.subject.emtreeProtein hipO
dc.subject.emtreeUnclassified drug
dc.subject.emtreeArticle
dc.subject.emtreeBacterium culture
dc.subject.emtreeBacterium isolate
dc.subject.emtreeCampylobacter
dc.subject.emtreeCampylobacter jejuni
dc.subject.emtreeControlled study
dc.subject.emtreeDiagnostic accuracy
dc.subject.emtreeDisease surveillance
dc.subject.emtreeEnzyme activity
dc.subject.emtreeGene expression
dc.subject.emtreeGene identification
dc.subject.emtreeGene targeting
dc.subject.emtreeNonhuman
dc.subject.emtreePriority journal
dc.subject.emtreeProtein hydrolysis
dc.subject.emtreeReaction analysis
dc.subject.emtreeReal time polymerase chain reaction
dc.subject.emtreeSpecies distribution
dc.subject.emtreeThermophilic bacterium
dc.subject.meshAmidohydrolases
dc.subject.meshAnimals
dc.subject.meshBacterial proteins
dc.subject.meshCampylobacter
dc.subject.meshCampylobacter infections
dc.subject.meshHippurates
dc.subject.meshHydrolysis
dc.subject.meshPolymerase chain reaction
dc.subject.meshPoultry
dc.subject.meshPoultry diseases
dc.subject.scopusCampylobacter; Nalidixic Acid; Antibiotic Resistance
dc.subject.wosMicrobiology
dc.titleThe detection of hipO gene by real-time PCR in thermophilic Campylobacter spp. with very weak and negative reaction of hippurate hydrolysis
dc.typeArticle
dspace.entity.typePublication
local.contributor.departmentVeteriner Fakültesi/Mikrobiyoloji Ana Bilim Dalı
local.indexed.atPubMed
local.indexed.atScopus

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