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Glucose signaling pathway and growth conditions regulate gene expression in retrotransposon Ty2

dc.contributor.buuauthorTürkel, Sezai
dc.contributor.buuauthorBayram, Özgür
dc.contributor.buuauthorArik, Elif Pınar
dc.contributor.departmentFen Edebiyat Fakültesi
dc.contributor.departmentBiyoloji Ana Bilim Dalı
dc.contributor.orcid0000-0002-0283-5322
dc.contributor.researcheridP-6326-2019
dc.contributor.researcheridAAH-6281-2021
dc.contributor.scopusid7003319075
dc.contributor.scopusid23501409500
dc.contributor.scopusid22940104500
dc.date.accessioned2022-03-02T08:22:53Z
dc.date.available2022-03-02T08:22:53Z
dc.date.issued2009
dc.description.abstractGene expression in the yeast retrotransposon Ty2 is regulated at transcriptional and translational levels. In this study, we have shown that the transcription of Ty2 is partially dependent on the membrane-bound glucose sensors Gpr1p and Mth1p in Saccharomyces cerevisiae. Transcription of Ty2 decreased approx. 3-fold in the gpr1, mth1 yeast mutant. Moreover, our results revealed that the transcription of Ty2 fluctuates during the growth stages of S. cerevisae. Both transcription and the frameshift rate of Ty2 rapidly dropped when the stationary stage yeast cells were inoculated into fresh medium. There was an instant activation of Ty2 transcription and a high level expression during the entire logarithmic stage of yeast growth. However, the transcription of Ty2 decreased 2-fold when the yeast cultures entered the stationary stage. The frameshift rate in Ty2 also varied depending on the growth conditions. The highest frameshift level was observed during the mid-logarithmic stage. It decreased up to 2-fold during the stationary stage. Furthermore, we have found that the frameshift rate of Ty2 diminished at least 5-fold in slowly growing yeasts. These results indicate that the transcription and the frameshift efficiency are coordinately regulated in the retrotransposon Ty2 depending on the growth conditions of S. cerevisiae.
dc.identifier.citationTürkel, S. vd. (2009). "Glucose signaling pathway and growth conditions regulate gene expression in retrotransposon Ty2". Zeitschrift fur Naturforschung - Section C Journal of Biosciences, 64(7-8), 526-532.
dc.identifier.doi10.1515/znc-2009-7-811
dc.identifier.endpage532
dc.identifier.issn0939-5075
dc.identifier.issue7-8
dc.identifier.pubmed19791505
dc.identifier.scopus2-s2.0-70350578544
dc.identifier.startpage526
dc.identifier.urihttps://doi.org/10.1515/znc-2009-7-811
dc.identifier.urihttps://www.degruyter.com/document/doi/10.1515/znc-2009-7-811/html
dc.identifier.urihttp://hdl.handle.net/11452/24782
dc.identifier.volume64
dc.identifier.wos000271046000011
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherWalter De Gruyter Gmbh
dc.relation.bap2004-39
dc.relation.journalZeitschrift fur Naturforschung - Section C Journal of Biosciences
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.relation.tubitakTÜBİTAK (104T307)
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectFrameshift
dc.subjectGlucose sensing
dc.subjectTy elements
dc.subjectVirus-like particles
dc.subjectSaccharomyces-cerevisiae
dc.subjectTranscriptional activation
dc.subjectOsmotic-stress
dc.subjectCell-growth
dc.subjectYeast
dc.subjectElements
dc.subjectSite
dc.subjectTransposition
dc.subjectSequence
dc.subjectBiochemistry & molecular biology
dc.subjectPharmacology & pharmacy
dc.subjectSaccharomyces cerevisiae
dc.subject.emtreeGlucose
dc.subject.emtreeArticle
dc.subject.emtreeCell division
dc.subject.emtreeFrameshift mutation
dc.subject.emtreeGenetic transcription
dc.subject.emtreeGenetics
dc.subject.emtreeGrowth, development and aging
dc.subject.emtreeKinetics
dc.subject.emtreePhysiology
dc.subject.emtreePlasmid
dc.subject.emtreeRetroposon
dc.subject.emtreeSaccharomyces cerevisiae
dc.subject.emtreeSignal transduction
dc.subject.meshCell division
dc.subject.meshFrameshift mutation
dc.subject.meshGlucose
dc.subject.meshKinetics
dc.subject.meshPlasmids
dc.subject.meshRetroelements
dc.subject.meshSaccharomyces cerevisiae
dc.subject.meshSignal transduction
dc.subject.meshTranscription, genetic
dc.subject.scopusRetroposon; Integrases; Gag Protein
dc.subject.wosBiochemistry & molecular biology
dc.subject.wosPharmacology & pharmacy
dc.titleGlucose signaling pathway and growth conditions regulate gene expression in retrotransposon Ty2
dc.typeArticle
dspace.entity.typePublication
local.contributor.departmentFen Edebiyat Fakültesi/Biyoloji Ana Bilim Dalı
local.indexed.atWOS
local.indexed.atScopus
local.indexed.atPubMed

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