Publication:
Genetic transformation of an Ac/Ds-based transposon tagging system in carrot (Daucus carota L.)

dc.contributor.authorMasson, P.
dc.contributor.authorSimon, Philipp W.
dc.contributor.buuauthorİpek, Ahmet
dc.contributor.departmentZiraat Fakültesi
dc.contributor.departmentBahçe Bitkileri Bölümü
dc.contributor.scopusid6603912487
dc.date.accessioned2022-01-04T06:29:05Z
dc.date.available2022-01-04T06:29:05Z
dc.date.issued2006-12
dc.description.abstractMaize transposable elements, Activator (Ac) and Dissociation (Ds) have been transformed into several heterologous plant species and they have been successfully used to tag and clone genes in Arabidopsis, flax, petunia, tobacco, and tomato. To investigate the possibility of transposon tagging for subsequent cloning of carrot genes, carrot calli were transformed with a modified maize transposable element Activator-transposase (Ac-TPase) and Ds using an Agrobacterium-mediated transformation method. Ds excision was observed in the tissue culture-regenerated plants carrying both Ac-TPase and Ds. Analysis of Ds footprints in six plants demonstrated the occurrence of small deletions at the donor site. Reinsertion of Ds into new chromosomal sites was detected in the transgenic plants analysed and the analysis of sequences flanking Ds at the insertion sites using TAIL-PCR demonstrated that 37.5% of Ds insertions were into gene regions in the carrot genome. Although previous studies suggested that the autonomous Ac element may not be a suitable transposon for insertional mutagenesis in carrot, our results deduced that the Ac/Ds based two-element transposon tagging system can be another tool to mutagenise the carrot genome for the purpose of cloning carrot genes.
dc.identifier.citationİpek, A. vd. (2006). ''Genetic transformation of an Ac/Ds-based transposon tagging system in carrot (Daucus carota L.)''. European Journal of Horticultural Science, 71(6), 245-251.
dc.identifier.endpage251
dc.identifier.issn1611-4426
dc.identifier.issue6
dc.identifier.scopus2-s2.0-33845866657
dc.identifier.startpage245
dc.identifier.urihttp://hdl.handle.net/11452/23831
dc.identifier.volume71
dc.identifier.wos000243221400003
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherISHS
dc.relation.collaborationYurt dışı
dc.relation.journalEuropean Journal of Horticultural Science
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectAgriculture
dc.subjectTissue culture
dc.subjectMutagenesis
dc.subjectGene cloning
dc.subjectAgrobacterium
dc.subjectZea mays
dc.subjectRhizobium
dc.subjectPetunia
dc.subjectNicotiana tabacum
dc.subjectLycopersicon esculentum
dc.subjectLinum usitatissimum
dc.subjectDaucus carota
dc.subjectArabidopsis
dc.subjectAgrobacterium
dc.subjectMarker
dc.subjectCultures
dc.subjectCells
dc.subjectPlants
dc.subjectTobacco
dc.subjectExcision
dc.subjectArabidopsis-thaliana
dc.subjectAC
dc.subjectMaize
dc.subjectElement activator
dc.subject.scopusT-Dna; Transposons; Functional Genomics
dc.subject.wosHorticulture
dc.titleGenetic transformation of an Ac/Ds-based transposon tagging system in carrot (Daucus carota L.)
dc.typeArticle
dc.wos.quartileQ4
dspace.entity.typePublication
local.contributor.departmentZiraat Fakültesi/Bahçe Bitkileri Bölümü
local.indexed.atScopus
local.indexed.atWOS

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