Publication:
Overexpression of the long noncoding RNA homeoboxA transcript at the distal tip predicts poor prognosis in a KRAS-independent manner in periampullary region tumors

dc.contributor.buuauthorBalçın, Özkan
dc.contributor.buuauthorAk, Seçil Aksoy
dc.contributor.buuauthorTunca, Berrin
dc.contributor.buuauthorKaya, Ekrem
dc.contributor.buuauthorEgeli, Ünal
dc.contributor.buuauthorTezcan, Gülçin
dc.contributor.buuauthorUğraş, Nesrin
dc.contributor.buuauthorÇeçener, Gülşah
dc.contributor.buuauthorIşık, Özgen
dc.contributor.buuauthorDündar, Halit Ziya
dc.contributor.buuauthorYerci, Ömer
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıbbi Biyoloji Ana Bilim Dalları
dc.contributor.departmentGenel Cerrahi Ana Bilim Dalı
dc.contributor.departmentPatoloji Ana Bilim Dalı
dc.contributor.orcid0000-0002-3760-9755
dc.contributor.orcid0000-0002-1619-6680
dc.contributor.orcid0000-0002-9562-4195
dc.contributor.orcid0000-0001-7904-883X
dc.contributor.orcid0000-0002-5956-8755
dc.contributor.orcid0000-0002-3820-424X
dc.contributor.orcid0000-0002-9541-5035
dc.contributor.orcid0000-0002-7346-7440
dc.contributor.researcheridADM-8457-2022
dc.contributor.researcheridABI-6078-2020
dc.contributor.researcheridAAG-7319-2021
dc.contributor.researcheridAAH-1420-2021
dc.contributor.researcheridAAH-3843-2020
dc.contributor.researcheridAAH-2716-2021
dc.contributor.researcheridAAP-9988-2020
dc.contributor.researcheridP-5779-2019
dc.contributor.researcheridABH-2238-2021
dc.contributor.researcheridAAW-9602-2020
dc.contributor.scopusid57189756976
dc.contributor.scopusid57200365076
dc.contributor.scopusid6602965754
dc.contributor.scopusid7004568109
dc.contributor.scopusid55665145000
dc.contributor.scopusid25650627600
dc.contributor.scopusid55386535600
dc.contributor.scopusid6508156530
dc.contributor.scopusid36600543700
dc.contributor.scopusid55453773300
dc.contributor.scopusid6603810549
dc.date.accessioned2023-10-31T12:51:06Z
dc.date.available2023-10-31T12:51:06Z
dc.date.issued2018
dc.description.abstractObjectives: Periampullary region tumors (PRTs) are the fifth highest cause of cancer-related deaths worldwide. Although recent studies have highlighted the prognostic value of the long noncoding RNA HomeoboxA transcript at the distal tip (HOTTIP) in patients with pancreatic ductal adenocarcinoma, the relationship between HOTTIP and clinical outcome of all PRTs remains obscure. The aim of this study was to clarify the prognostic significance of HOTTIP in patients with all PRTs related to KRAS mutational status. Methods: HomeoboxA transcript at the distal tip expression was detected in 100 PRT samples using quantitative real-time polymerase chain reaction. The associations between HOTTIP levels, clinicopathological factors, and patient prognosis were also analyzed. Results: The expression of HOTTIP was found to be significantly upregulated by 32-fold (P = 0.031) in tumor tissues compared with normal tissues. The over expression of HOTTIP was related with presence of invasion and metastasis (P = 0.0467, P = 0.0256). In addition, increased HOTTIP expression was associated with poor prognosis independent of KRAS mutation (P < 0.001; n = 72). Moreover, multivariate analysis showed that high HOTTIP expression was an unfavorable prognostic factor for overall survival. Conclusions: Our findings indicate that high levels of HOTTIP expression have the potential to be an independent, unfavorable prognostic factor for patients with PRT.
dc.identifier.citationBalçın, Ö. vd. (2018). ''Overexpression of the long noncoding RNA homeoboxA transcript at the distal tip predicts poor prognosis in a KRAS-independent manner in periampullary region tumors''. Pancreas, 47(2), 213-220.
dc.identifier.endpage220
dc.identifier.issn0885-3177
dc.identifier.issn1536-4828
dc.identifier.issue2
dc.identifier.pubmed29329159
dc.identifier.scopus2-s2.0-85040992161
dc.identifier.startpage213
dc.identifier.urihttps://doi.org/10.1097/MPA.0000000000000984
dc.identifier.urihttps://journals.lww.com/pancreasjournal/fulltext/2018/02000/overexpression_of_the_long_noncoding_rna_homeoboxa.10.aspx
dc.identifier.urihttp://hdl.handle.net/11452/34704
dc.identifier.volume47
dc.identifier.wos000423205000013
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherLippincott Williams & Wilkins
dc.relation.bapBUAP(T)-2012/1
dc.relation.journalPancreas
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectGastroenterology & hepatology
dc.subjectLncRNA
dc.subjectHOTTIP
dc.subjectKRAS
dc.subjectPeriampullary region tumors
dc.subjectPrognosis
dc.subjectPancreatic ductal adenocarcinoma
dc.subjectCancer
dc.subjectHotair
dc.subjectHottip
dc.subjectProgression
dc.subjectChromatin
dc.subjectMetastasis
dc.subjectExpression
dc.subjectBiomarkers
dc.subjectEvolution
dc.subject.emtreeK ras protein
dc.subject.emtreeLong noncoding rna homeoboxa transcript at the distal tip
dc.subject.emtreeLong untranslated RNA
dc.subject.emtreeUnclassified drug
dc.subject.emtreeKRAS protein, human
dc.subject.emtreeLong noncoding RNA HOTTIP, human
dc.subject.emtreeLong untranslated RNA
dc.subject.emtreeProtein p21
dc.subject.emtreeAdult
dc.subject.emtreeAged
dc.subject.emtreeArticle
dc.subject.emtreeAssociation
dc.subject.emtreeBile duct tumor
dc.subject.emtreeBiliary tract cancer
dc.subject.emtreeCancer prognosis
dc.subject.emtreeCancer survival
dc.subject.emtreeClinical feature
dc.subject.emtreeControlled study
dc.subject.emtreeDistant metastasis
dc.subject.emtreeFemale
dc.subject.emtreeGene mutation
dc.subject.emtreeGene overexpression
dc.subject.emtreeHuman
dc.subject.emtreeHuman tissue
dc.subject.emtreeMajor clinical study
dc.subject.emtreeMale
dc.subject.emtreeOverall survival
dc.subject.emtreePancreas tumor
dc.subject.emtreePancreaticoduodenectomy
dc.subject.emtreePeriampullary region tumor
dc.subject.emtreePriority journal
dc.subject.emtreeQuantitative analysis
dc.subject.emtreeReal time polymerase chain reaction
dc.subject.emtreeTumor growth
dc.subject.emtreeTumor localization
dc.subject.emtreeUpregulation
dc.subject.emtreeVater papilla tumor
dc.subject.emtreeGene expression regulation
dc.subject.emtreeGenetics
dc.subject.emtreeKaplan meier method
dc.subject.emtreeMiddle aged
dc.subject.emtreeMutation
dc.subject.emtreePancreas carcinoma
dc.subject.emtreePathology
dc.subject.emtreePrognosis
dc.subject.emtreeVery elderly
dc.subject.meshAdult
dc.subject.meshAged
dc.subject.meshAged, 80 and over
dc.subject.meshCarcinoma, pancreatic ductal
dc.subject.meshFemale
dc.subject.meshGene expression regulation, neoplastic
dc.subject.meshHumans
dc.subject.meshKaplan-meier estimate
dc.subject.meshMale
dc.subject.meshMiddle aged
dc.subject.meshMutation
dc.subject.meshPancreatic neoplasms
dc.subject.meshPrognosis
dc.subject.meshProto-oncogene proteins p21(ras)
dc.subject.meshRNA, long noncoding
dc.subject.scopusMicrorna; Growth Arrest Specific Transcript 5; Small Nucleolar RNA
dc.subject.wosGastroenterology & hepatology
dc.titleOverexpression of the long noncoding RNA homeoboxA transcript at the distal tip predicts poor prognosis in a KRAS-independent manner in periampullary region tumors
dc.typeArticle
dc.wos.quartileQ3
dspace.entity.typePublication
local.contributor.departmentTıp Fakültesi/Genel Cerrahi Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Tıbbi Biyoloji Ana Bilim Dalları
local.contributor.departmentTıp Fakültesi/Patoloji Ana Bilim Dalı
local.indexed.atScopus
local.indexed.atWOS

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