Publication:
Phenotypic and molecular characterization of Yersinia ruckeri isolates from Rainbow Trout (Oncorhynchus mykiss, Walbaum, 1792) in Turkey

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dc.contributor.authorOnuk, Ertan Emek
dc.contributor.authorÇiftçi, Alper
dc.contributor.authorÇiftçi, Gülay
dc.contributor.authorFındık, Arzu
dc.contributor.authorBalta, Fikri
dc.contributor.authorÖzer, Selmin
dc.contributor.authorÇoban, Ahmet Yılmaz
dc.contributor.buuauthorAltun, Soner
dc.contributor.departmentVeterinerlik Fakültesi
dc.contributor.departmentMikrobiyoloji Ana Bilim Dalı
dc.contributor.orcid0000-0001-9096-875X
dc.contributor.researcheridAAG-8518-2021
dc.contributor.scopusid56269221600
dc.date.accessioned2022-01-07T08:10:48Z
dc.date.available2022-01-07T08:10:48Z
dc.date.issued2011
dc.description.abstractThe aim of the study was the phenotypic and molecular characterization of Yersinia (Y.) ruckeri strains, the causative agent of Enteric Red mouth Disease (ERM), by antibiotyping, random amplified polymorphic DNA-polymerase chain reaction (RAPD-PCR) and sodium dodecylsulphate-polyacrylamide gel electrophoresis (SDS-PAGE) patterns of whole cell proteins. For this aim, a total of 97 Y ruckeri isolates were analyzed. The isolates were distinguished into ten antibiotypes and six phenotypes according to their resistance properties and whole cell protein profiles, respectively. Also, a glycoprotein band of approximately 25.5 kDa was observed in all Y ruckeri strains tested. In all strains, six different RAPD types were observed. In conclusion, Y ruckeri strains isolated from rainbow trout of fish farms in Turkey showed variation according to their phenotypic and genotypic characteristics, and the use of these three typing techniques in double and triple combinations could be more useful for discriminating the strains.
dc.identifier.citationOnuk, E. E. vd. (2011). "Phenotypic and molecular characterization of Yersinia ruckeri isolates from Rainbow Trout (Oncorhynchus mykiss, Walbaum, 1792) in Turkey". Berliner und Munchener Tierarztliche Wochenschriftt, 124(7-8), 320-328.
dc.identifier.endpage328
dc.identifier.issn0005-9366
dc.identifier.issn1439-0299
dc.identifier.issue7-8
dc.identifier.pubmed21848040
dc.identifier.scopus2-s2.0-84555187822
dc.identifier.startpage320
dc.identifier.urihttps://doi.org/10.2376/0005-9366-124-320
dc.identifier.urihttps://dergipark.org.tr/en/pub/uluvfd/issue/35773/399275
dc.identifier.urihttp://hdl.handle.net/11452/23924
dc.identifier.volume124
dc.identifier.wos000292802800008
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherSchluetersche Verlagsgesellschaft
dc.relation.collaborationYurt içi
dc.relation.journalBerliner und Munchener Tierarztliche Wochenschrift
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectVeterinary sciences
dc.subjectAntibiotic resistance
dc.subjectGlycoprotein
dc.subjectRAPD-PCR
dc.subjectSDS-PAGE
dc.subjectYersinia ruckeri
dc.subjectCell protein profiles
dc.subjectPseudomonas-aeruginosa
dc.subjectAntimicrobial susceptibility
dc.subjectNumerical-analysis
dc.subjectPolymorphic DNA
dc.subjectTyping methods
dc.subjectStrains
dc.subjectIdentification
dc.subjectAmplification
dc.subjectOncorhynchus mykiss
dc.subjectYersinia ruckeri
dc.subject.emtreeAntiinfective agent
dc.subject.emtreeBacterial protein
dc.subject.emtreeGlycoprotein
dc.subject.emtreeAnimal
dc.subject.emtreeAnimal disease
dc.subject.emtreeArticle
dc.subject.emtreeBacterium identification
dc.subject.emtreeClassification
dc.subject.emtreeDrug effect
dc.subject.emtreeFish disease
dc.subject.emtreeGenetics
dc.subject.emtreeGenotype
dc.subject.emtreeIsolation and purification
dc.subject.emtreeMicrobiological examination
dc.subject.emtreeMicrobiology
dc.subject.emtreePhenotype
dc.subject.emtreePhylogeny
dc.subject.emtreePolymerase chain reaction
dc.subject.emtreeRainbow trout
dc.subject.emtreeReproducibility
dc.subject.emtreeSpecies difference
dc.subject.emtreeTurkey (republic)
dc.subject.emtreeYersinia infection
dc.subject.emtreeYersinia ruckeri
dc.subject.meshAnimals
dc.subject.meshAnti-bacterial agents
dc.subject.meshBacterial proteins
dc.subject.meshBacterial typing techniques
dc.subject.meshFish diseases
dc.subject.meshGenotype
dc.subject.meshGlycoproteins
dc.subject.meshMicrobial sensitivity tests
dc.subject.meshOncorhynchus mykiss
dc.subject.meshPhenotype
dc.subject.meshPhylogeny
dc.subject.meshPolymerase chain reaction
dc.subject.meshReproducibility of results
dc.subject.meshSpecies specificity
dc.subject.meshTurkey
dc.subject.meshYersinia infections
dc.subject.meshYersinia ruckeri
dc.subject.scopusYersinia Ruckeri; Enteric Redmouth Disease; Oncorhynchus Mykiss
dc.subject.wosVeterinary sciences
dc.titlePhenotypic and molecular characterization of Yersinia ruckeri isolates from Rainbow Trout (Oncorhynchus mykiss, Walbaum, 1792) in Turkey
dc.typeArticle
dc.wos.quartileQ2
dspace.entity.typePublication
local.contributor.departmentVeterinerlik Fakültesi/Mikrobiyoloji Ana Bilim Dalı
local.indexed.atScopus
local.indexed.atWOS

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