Infectious pancreatic necrosis virus (IPNV) serotype Sp is prevalent in Turkish rainbow trout farms

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dc.contributor.authorHansen, E. F.
dc.contributor.authorMarkussen, T.
dc.contributor.authorRimstad, E.
dc.contributor.buuauthorBüyükekiz, Ayşe Gül
dc.contributor.buuauthorAltun, Soner
dc.contributor.buuauthorSatıcıoğlu, İzzet Burçin
dc.contributor.buuauthorDuman, Muhammed
dc.contributor.departmentUludağ Üniversitesi/Veterinerlik Fakültesi/Su Hayvanları Hastalıkları Bölümü.tr_TR
dc.contributor.orcid0000-0001-9096-875Xtr_TR
dc.contributor.orcid0000-0002-2721-3204tr_TR
dc.contributor.orcid0000-0001-7707-2705tr_TR
dc.contributor.researcheridJIH-9655-2023
dc.contributor.researcheridAAG-8518-2021
dc.contributor.researcheridAAD-4156-2019
dc.contributor.researcheridT-1697-2019
dc.contributor.scopusid55567777200tr_TR
dc.contributor.scopusid56269221600tr_TR
dc.contributor.scopusid57194590388tr_TR
dc.contributor.scopusid55568071100tr_TR
dc.date.accessioned2024-04-01T10:44:39Z
dc.date.available2024-04-01T10:44:39Z
dc.date.issued2018-01
dc.description.abstractInfectious pancreatic necrosis virus (IPNV) is a common pathogen of rainbow trout (Oncorhynchus mykiss) in Turkey. We found that 455 of 1,676 sample pools tested were IPNV positive. Positive samples were found in all geographical regions where sampling was conducted. Sequence and phylogenetic analyses of VP2 from 30 isolates representing all regions showed that the viruses were highly similar in sequence and grouped within Genogroup 5 (serotype Sp-A2). No correlations between sequences, sampling sites or geographical origins were identified. Although clinical disease was evident in several farms, analyses of the amino acid sequence of VP2 showed that all virus strains harboured the P217T221 motif, assumed to be associated with low virulence. We conclude that IPNV is prevalent in Turkish rainbow trout farms and that the viruses are very homogenous and likely to be of European origin. Frequent exchange of eggs and live fish within the farming industry may explain the homogeneity of the IPNV.en_US
dc.description.sponsorshipGıda Tarım ve Hayvancılık Bakanlığı (14/AR-GE/26)
dc.identifier.citationBüyükekiz, A. G. vd. (2018). ''Infectious pancreatic necrosis virus (IPNV) serotype Sp is prevalent in Turkish rainbow trout farms''. Journal of Fish Diseases, 41(1), 95-104.en_US
dc.identifier.doihttps://doi.org/10.1111/jfd.12675
dc.identifier.endpage104tr_TR
dc.identifier.issn0140-7775
dc.identifier.issn1365-2761
dc.identifier.issue1tr_TR
dc.identifier.pubmed28745835tr_TR
dc.identifier.scopus2-s2.0-85026291096tr_TR
dc.identifier.startpage95tr_TR
dc.identifier.urihttps://onlinelibrary.wiley.com/doi/10.1111/jfd.12675
dc.identifier.urihttps://hdl.handle.net/11452/40888
dc.identifier.volume41tr_TR
dc.identifier.wos000418245400011tr_TR
dc.indexed.pubmedPubMeden_US
dc.indexed.scopusScopusen_US
dc.indexed.wosSCIEen_US
dc.language.isoenen_US
dc.publisherWileyen_US
dc.relation.collaborationYurt dışıtr_TR
dc.relation.journalJournal of Fish Diseasesen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergitr_TR
dc.relation.tubitak2214/a - 1059B141500122tr_TR
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectFisheries en_US
dc.subjectMarine & freshwater biology en_US
dc.subjectVeterinary sciences en_US
dc.subjectInfectious pancreatic necrosis virus en_US
dc.subjectIPNV en_US
dc.subjectPhylogenetic characterization en_US
dc.subjectGenotypes en_US
dc.subjectRainbow trout en_US
dc.subjectAmino-acid-sequences en_US
dc.subjectGenome segment en_US
dc.subjectOncorhynchus-mykiss en_US
dc.subjectAtlantic salmon en_US
dc.subjectMoleculer characterization en_US
dc.subjectPhylogenetic-relationships en_US
dc.subjectGenetic diversity en_US
dc.subjectRNA-polymerase en_US
dc.subjectCell-culture en_US
dc.subjectVirulence en_US
dc.subject.emtreeAbdominal swelling en_US
dc.subject.emtreeAgricultural land en_US
dc.subject.emtreeAgricultural worker en_US
dc.subject.emtreeAmino acid sequence en_US
dc.subject.emtreeArticle en_US
dc.subject.emtreeAscites en_US
dc.subject.emtreeControlled study en_US
dc.subject.emtreeEnzyme linked immunosorbent assay en_US
dc.subject.emtreeExophthalmos en_US
dc.subject.emtreeInfectious pancreatic necrosis virus en_US
dc.subject.emtreeLoss of appetite en_US
dc.subject.emtreeMicrobiological examination en_US
dc.subject.emtreeNonhuman en_US
dc.subject.emtreeOncorhynchus mykiss en_US
dc.subject.emtreePhylogenetic tree en_US
dc.subject.emtreePrevalence en_US
dc.subject.emtreeQuantitative analysis en_US
dc.subject.emtreeReal time polymerase chain reaction en_US
dc.subject.emtreeSequence alignment en_US
dc.subject.emtreeSerotype en_US
dc.subject.emtreeTurkey (republic)en_US
dc.subject.emtreeVirus strainen_US
dc.subject.emtreeVirus virulenceen_US
dc.subject.emtreeAnimalen_US
dc.subject.emtreeAquacultureen_US
dc.subject.emtreeBirnavirus infectionen_US
dc.subject.emtreeFish diseaseen_US
dc.subject.emtreeGeneticsen_US
dc.subject.emtreeInfectious pancreatic necrosis virusen_US
dc.subject.emtreeIsolation and purificationen_US
dc.subject.emtreeOncorhynchus mykiss en_US
dc.subject.emtreePhylogeny en_US
dc.subject.emtreeProtein motif en_US
dc.subject.emtreeSerotype en_US
dc.subject.emtreeTurkey (bird) en_US
dc.subject.emtreeVeterinary medicine en_US
dc.subject.emtreeVirology en_US
dc.subject.meshAmino acid motifsen_US
dc.subject.meshAmino acid sequenceen_US
dc.subject.meshAnimalsen_US
dc.subject.meshAquacultureen_US
dc.subject.meshBirnaviridae infectionsen_US
dc.subject.meshFish diseasesen_US
dc.subject.meshInfectious pancreatic necrosis virusen_US
dc.subject.meshOncorhynchus mykissen_US
dc.subject.meshPhylogenyen_US
dc.subject.meshSerogroupen_US
dc.subject.meshTurkeyen_US
dc.subject.scopusFish; Birnaviridae; Alloherpesviridaeen_US
dc.subject.wosFisheriesen_US
dc.subject.wosMarine & freshwater biologyen_US
dc.subject.wosVeterinary sciencesen_US
dc.titleInfectious pancreatic necrosis virus (IPNV) serotype Sp is prevalent in Turkish rainbow trout farmsen_US
dc.typeArticleen_US

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