Development of EST based SSR markers for garlic genome

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dc.contributor.authorSimon, Philipp W.
dc.contributor.authorWako, T.
dc.contributor.buuauthorİpek, Meryem
dc.contributor.buuauthorİpek, Ahmet
dc.contributor.buuauthorCansev, Asuman
dc.contributor.buuauthorŞeniz, Vedat
dc.contributor.departmentUludağ Üniversitesi/Ziraat Fakültesi/Bahçe Bitkileri Bölümü.tr_TR
dc.contributor.orcid0000-0002-3353-846Xtr_TR
dc.contributor.researcheridAAH-3233-2021tr_TR
dc.contributor.researcheridAAH-4255-2019tr_TR
dc.contributor.scopusid16031208900tr_TR
dc.contributor.scopusid6603912487tr_TR
dc.contributor.scopusid26326677200tr_TR
dc.contributor.scopusid13604787100tr_TR
dc.date.accessioned2022-04-14T08:14:47Z
dc.date.available2022-04-14T08:14:47Z
dc.date.issued2012
dc.descriptionBu çalışma, 21-24 May 2012 tarihleri arasında Fukuoka[Japonya]’da düzenlenen 6th International Symposium on Edible Alliaceae’da bildiri olarak sunulmuştur.tr_TR
dc.description.abstractAlthough it is time consuming and expensive to develop SSR markers, they have some advantages such as co-dominancy, reproducibility and high amount of polymorphic alleles as a PCR based marker system. For genetic and molecular studies in garlic, generally RAPD and AFLP markers have been utilized. However, development and use of SSR markers have been limited to few studies. In order to develop detailed genetic map and genetic studies, co-dominant marker systems like SSRs and SNPs are necessary in garlic. The purpose of this study was the development of SSR markers from expressed sequence tags (ESTs) derived from the genome of garlic. The SSR motifs in EST sequences were screened and it was revealed that SSR motifs are abundant in garlic ESTs. So far six SSR markers have been developed. EST based SSR markers could be used to map genes to garlic genetic maps directly and assessment of genetic diversity for the expressed regions of the garlic genome.en_US
dc.description.sponsorshipInt Soc Hort Sci (ISHS)en_US
dc.identifier.citationİpek, M. vd. (2012). "Development of EST based SSR markers for garlic genome". ed. T. Wako. Acta Horticulturae, VI International Symposium on Edible Alliaceae, 969, 81-83.en_US
dc.identifier.endpage83tr_TR
dc.identifier.isbn978-90-66056-95-4
dc.identifier.issn0567-7572
dc.identifier.scopus2-s2.0-84872020691tr_TR
dc.identifier.startpage81tr_TR
dc.identifier.urihttps://www.actahort.org/books/969/969_7.htm
dc.identifier.urihttp://hdl.handle.net/11452/25777
dc.identifier.volume969tr_TR
dc.identifier.wos000324531800007tr_TR
dc.indexed.scopusScopusen_US
dc.indexed.wosCPCISen_US
dc.language.isoenen_US
dc.publisherInt Soc Horticultural Scienceen_US
dc.relation.bapZ-2010/50tr_TR
dc.relation.collaborationYurt dışıtr_TR
dc.relation.journalActa Horticulturae, VI International Symposium on Edible Alliaceaeen_US
dc.relation.publicationcategoryKonferans Öğesi - Uluslararasıtr_TR
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectAgricultureen_US
dc.subjectPlant sciencesen_US
dc.subjectAllium sativumen_US
dc.subjectSimple sequence repeatsen_US
dc.subjectExpressed sequence tagen_US
dc.subjectGenetic mappingen_US
dc.subjectAllium-sativum l.en_US
dc.subjectGenetic diversityen_US
dc.subjectRapd markersen_US
dc.subjectClonesen_US
dc.subjectAllium sativumen_US
dc.subject.scopusGarlic; Allium Roseum; Boltingen_US
dc.subject.wosAgronomyen_US
dc.subject.wosPlant sciencesen_US
dc.subject.wosHorticultureen_US
dc.titleDevelopment of EST based SSR markers for garlic genomeen_US
dc.typeProceedings Paper

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