Publication:
Early stage alterations in CA1 extracellular region proteins indicate dysregulation of IL6 and iron homeostasis in the 5XFAD Alzheimer's disease mouse model

dc.contributor.authorGürel, Büşra
dc.contributor.authorKeleştemur, Seda
dc.contributor.authorOzansoy, Mehmet
dc.contributor.authorUlus, İsmail Hakkı
dc.contributor.authorBaşar, Merve Karayel
dc.contributor.authorŞahin, Betül
dc.contributor.authorTuzuner, Mete Bora
dc.contributor.authorBaykal, Ahmet Tarık
dc.contributor.buuauthorCansev, Mehmet
dc.contributor.buuauthorSevinç, Cansu
dc.contributor.buuauthorÖcalan, Büşra
dc.contributor.buuauthorÇakır, Ayşen
dc.contributor.buuauthorAydın, Sami
dc.contributor.buuauthorKahveci, Nevzat
dc.contributor.buuauthorTaşkapılıoğlu, Özlem
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentTıp Fakültesi
dc.contributor.departmentFizyoloji Ana Bilim Dalı
dc.contributor.departmentEczacılık Ana Bilim Dalı
dc.contributor.departmentNöroloji Ana Bilim Dalı
dc.contributor.orcid0000-0002-3405-3640
dc.contributor.orcid0000-0001-7729-7373
dc.contributor.orcid0000-0003-0841-8201
dc.contributor.orcid0000-0003-4436-3797
dc.contributor.researcheridM-9071-2019
dc.contributor.researcheridN-9927-2019
dc.contributor.researcheridA-6819-2018
dc.contributor.researcheridAAG-7070-2021
dc.contributor.researcheridX-4479-2018
dc.contributor.scopusid8872816100
dc.contributor.scopusid56473593500
dc.contributor.scopusid57191911801
dc.contributor.scopusid57191915856
dc.contributor.scopusid7005387015
dc.contributor.scopusid6602597846
dc.contributor.scopusid23037226400
dc.date.accessioned2024-03-26T08:32:43Z
dc.date.available2024-03-26T08:32:43Z
dc.date.issued2018
dc.description.abstractIn recent years, an increasing number of research papers revealed that the compositional and volumetric alterations in the extracellular matrix are the consequences of aging and may be related to Alzheimer's disease (AD). In this study, we aimed to demonstrate the alterations in hippocampal extracellular fluid proteins in vivo using the 5XFAD mouse model. Samples were obtained from hippocampi of 5XFAD mice (n = 6) and their non-transgenic littermates by intracerebral push-pull perfusion technique at 3 months of age, representing the pre-pathological stage of the AD. Proteins in the hippocampal perfusates were analyzed by Ultra Performance Liquid Chromatography-Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometry (UPLC-ESI-qTOF-MS/MS). 178 proteins were identified and 19 proteins of them were found to be statistically significantly altered (p <= 0.05, fold change >= 40%, unique peptide count >= 3) in the hippocampal CA1 extracellular fluid of the 5XFAD mouse model. Ingenuity pathway analysis of the protein expression results identified IL6 as an upstream regulator. The upregulation of IL6 was validated by immunohistochemical staining of the hippocampus and cortex of the 5XFAD mice prior to A beta plaque formation. Furthermore, the iron level in the hippocampus was measured by inductively coupled plasma-mass spectrometry as IL6 is mentioned in several studies to take part in iron homeostasis and inflammation and found to be increased in 5XFAD mice hippocampus. Alterations in extracellular matrix proteins in addition to increasing amount of hippocampal IL6 and iron in the early stages of AD may reveal inflammation-mediated iron dyshomeostasis in the early stages of neurodegeneration.
dc.identifier.citationGürel, B. vd. (2018). ''Early stage alterations in CA1 extracellular region proteins indicate dysregulation of IL6 and iron homeostasis in the 5XFAD Alzheimer's disease mouse model''. Journal of Alzheimer's Disease, 61(4), 1399-1410.
dc.identifier.doihttps://doi.org/10.3233/JAD-170329
dc.identifier.endpage1410
dc.identifier.issn1387-2877
dc.identifier.issn1875-8908
dc.identifier.issue4
dc.identifier.pubmed29376847
dc.identifier.scopus2-s2.0-85048034279
dc.identifier.startpage1399
dc.identifier.urihttps://content.iospress.com/articles/journal-of-alzheimers-disease/jad170329
dc.identifier.urihttps://hdl.handle.net/11452/40625
dc.identifier.volume61
dc.identifier.wos000423364400015
dc.indexed.scopusScopus
dc.indexed.wosSCIE
dc.language.isoen
dc.publisherIOS Press
dc.relation.collaborationYurt içi
dc.relation.collaborationSanayi
dc.relation.journalJournal of Alzheimer's Disease
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi
dc.relation.tubitak112S414
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectNeurosciences & neurology
dc.subjectAlzheimer's disease
dc.subjectExtracellular matrix
dc.subjectIL6
dc.subjectIron
dc.subjectNeuroinflammation
dc.subjectProteomics
dc.subjectMild cognitive impairment
dc.subjectCerebrospinal-fluid
dc.subjectParkinsons-disease
dc.subjectProteomic analysis
dc.subjectPerineuronal nets
dc.subjectOxidative stress
dc.subjectTransgenic mice
dc.subjectBrain
dc.subjectInflammation
dc.subjectReceptor
dc.subject.emtreeAlpha 1 antitrypsin 1-4
dc.subject.emtreeAlpha 2 macroglobulin
dc.subject.emtreeAlpha 2 macroglobulin P
dc.subject.emtreeAmyloid beta protein
dc.subject.emtreeBeta actin like protein 2
dc.subject.emtreeCarbonate dehydratase II
dc.subject.emtreeCarboxylesterase 1C
dc.subject.emtreeCarboxylesterase 1D
dc.subject.emtreeCopper zinc superoxide dismutase
dc.subject.emtreeHeat shock related 70 kda protein 2
dc.subject.emtreeHermansky Pudlak syndrome 1 protein homolog
dc.subject.emtreeInterleukin 6
dc.subject.emtreeIron
dc.subject.emtreeKeratin type II cytoskeletal 5
dc.subject.emtreeLiver carboxylesterase 1
dc.subject.emtreeMyosin 4
dc.subject.emtreeNeuron specific enolase
dc.subject.emtreeReceptor type tyrosine protein phosphatase zeta
dc.subject.emtreeScleroprotein
dc.subject.emtreeSerine protease inhibitor A3K
dc.subject.emtreeSerine protease inhibitor A3M
dc.subject.emtreeSpectrin alpha chain erythrocytic 1
dc.subject.emtreeUbiquitin carboxyl terminal hydrolase isozyme L1
dc.subject.emtreeUnclassified drug
dc.subject.emtreeInterleukin 6
dc.subject.emtreeInterleukin-6, mouse
dc.subject.emtreeIron
dc.subject.emtree5xFAD mouse
dc.subject.emtreeAlzheimer disease
dc.subject.emtreeAmyloid plaque
dc.subject.emtreeAnimal experiment
dc.subject.emtreeAnimal model
dc.subject.emtreeAnimal tissue
dc.subject.emtreeArticle
dc.subject.emtreeBrain cortex
dc.subject.emtreeBrain level
dc.subject.emtreeControlled study
dc.subject.emtreeElectrospray mass spectrometry
dc.subject.emtreeExtracellular fluid
dc.subject.emtreeFemale
dc.subject.emtreeHippocampal CA1 region
dc.subject.emtreeHippocampal tissue
dc.subject.emtreeImmunohistochemistry
dc.subject.emtreeIn vivo study
dc.subject.emtreeInductively coupled plasma mass spectrometry
dc.subject.emtreeIron homeostasis
dc.subject.emtreeMouse
dc.subject.emtreeNonhuman
dc.subject.emtreePriority journal
dc.subject.emtreeProtein analysis
dc.subject.emtreeProtein expression
dc.subject.emtreeQuadrupole mass spectrometry
dc.subject.emtreeTime of flight mass spectrometry
dc.subject.emtreeUltra performance liquid chromatography
dc.subject.emtreeUpregulation
dc.subject.emtreeAlzheimer disease
dc.subject.emtreeAnimal
dc.subject.emtreeDisease model
dc.subject.emtreeGenetics
dc.subject.emtreeHippocampal CA1 region
dc.subject.emtreeHomeostasis
dc.subject.emtreeLiquid chromatography
dc.subject.emtreeMetabolism
dc.subject.emtreePathology
dc.subject.emtreeProteomics
dc.subject.emtreeTandem mass spectrometry
dc.subject.emtreeTransgenic mouse
dc.subject.meshAlzheimer Disease
dc.subject.meshAnimals
dc.subject.meshCA1 Region, hippocampal
dc.subject.meshChromatography, liquid
dc.subject.meshDisease models, animal
dc.subject.meshFemale
dc.subject.meshHomeostasis
dc.subject.meshInterleukin-6
dc.subject.meshIron
dc.subject.meshMice
dc.subject.meshMice, transgenic
dc.subject.meshProteomics
dc.subject.meshTandem mass spectrometry
dc.subject.scopusProteochondroitin Sulfate; Tenascin R; Animals
dc.subject.wosNeurosciences
dc.titleEarly stage alterations in CA1 extracellular region proteins indicate dysregulation of IL6 and iron homeostasis in the 5XFAD Alzheimer's disease mouse model
dc.typeArticle
dc.wos.quartileN/A
dspace.entity.typePublication
local.contributor.departmentTıp Fakültesi/Eczacılık Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Fizyoloji Ana Bilim Dalı
local.contributor.departmentTıp Fakültesi/Nöroloji Ana Bilim Dalı
local.indexed.atPubMed
local.indexed.atWOS
local.indexed.atScopus

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